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WormBase Tree Display for CDS: F40E10.2

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Name Class

F40E10.2SMapS_parentSequenceF40E10
StructureSource_exons1204
262387
438746
DB_infoDatabaseSwissProtUniProtAccQ20201
UniProtUniProtAccQ20201
UniProt_GCRPUniProtAccQ20201
AlphaFoldentryQ20201
NCBI_proteinGI_numberGI:3877011
TREEFAMTREEFAM_IDTF351735
Protein_idCHROMOSOME_XCAA936651
DB_remarkSOX-3 protein; contains similarity to Pfam domain PF00505 (HMG (high mobility group) box); contains similarity to Interpro domains IPR036910 (High mobility group box domain superfamily), IPR009071 (High mobility group box domain)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00004950
Corresponding_transcriptF40E10.2.1
F40E10.2.2
Corresponding_proteinCE05838
Corresponding_PCR_productcenix:119-d2
mv_F40E10.2
sjj_F40E10.2
Corresponding_oligo_set (14)
Matching_cDNA (19)
RNAi_resultWBRNAi00032017
WBRNAi00107409
WBRNAi00014643
WBRNAi00046838
Microarray_results (16)
Brief_identificationTranscription factor sox-3Accession_evidenceUniProtSP:Q20201
RNASeq_FPKM (74)
Associated_featureWBsf132408
Methodcurated