WormBase Tree Display for CDS: F40E10.2
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F40E10.2 | SMap | S_parent | Sequence | F40E10 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 204 | |||
262 | 387 | |||||
438 | 746 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q20201 | ||
UniProt | UniProtAcc | Q20201 | ||||
UniProt_GCRP | UniProtAcc | Q20201 | ||||
AlphaFold | entry | Q20201 | ||||
NCBI_protein | GI_number | GI:3877011 | ||||
TREEFAM | TREEFAM_ID | TF351735 | ||||
Protein_id | CHROMOSOME_X | CAA93665 | 1 | |||
DB_remark | SOX-3 protein; contains similarity to Pfam domain PF00505 (HMG (high mobility group) box); contains similarity to Interpro domains IPR036910 (High mobility group box domain superfamily), IPR009071 (High mobility group box domain) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00004950 | ||||
Corresponding_transcript | F40E10.2.1 | |||||
F40E10.2.2 | ||||||
Corresponding_protein | CE05838 | |||||
Corresponding_PCR_product | cenix:119-d2 | |||||
mv_F40E10.2 | ||||||
sjj_F40E10.2 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (19) | ||||||
RNAi_result | WBRNAi00032017 | |||||
WBRNAi00107409 | ||||||
WBRNAi00014643 | ||||||
WBRNAi00046838 | ||||||
Microarray_results (16) | ||||||
Brief_identification | Transcription factor sox-3 | Accession_evidence | UniProt | SP:Q20201 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf132408 | |||||
Method | curated |