WormBase Tree Display for CDS: M05D6.3
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| M05D6.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | M05D6 | |||
| Structure | Source_exons | 1 | 198 | |||
| 630 | 822 | |||||
| 1035 | 1468 | |||||
| 1651 | 1892 | |||||
| 1944 | 2070 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q21522 | ||
| UniProt | UniProtAcc | Q21522 | ||||
| UniProt_GCRP | UniProtAcc | Q21522 | ||||
| AlphaFold | entry | Q21522 | ||||
| NCBI_protein | GI_number | GI:3878664 | ||||
| Protein_id | CHROMOSOME_II | CAA91412 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00102 (Protein-tyrosine phosphatase); contains similarity to Interpro domains IPR003595 (Protein-tyrosine phosphatase, catalytic), IPR029021 (Protein-tyrosine phosphatase-like), IPR000242 (Tyrosine-specific protein phosphatase, PTPase domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00010876 | ||||
| Corresponding_transcript | M05D6.3.1 | |||||
| Corresponding_protein | CE03501 | |||||
| Corresponding_PCR_product | cenix:199-e1_1 | |||||
| mv_F35C11.2_1 | ||||||
| sjj_F35C11.2_1 | ||||||
| sjj_M05D6.3 | ||||||
| smd_F35C11.2_1 | ||||||
| Corresponding_oligo_set | A_12_P133845 | |||||
| GPL3518_CE03501 | ||||||
| GPL9450_M05D6.3 | ||||||
| cea2.d.34234 | ||||||
| Matching_cDNA (12) | ||||||
| RNAi_result | WBRNAi00046285 | |||||
| WBRNAi00046286 | ||||||
| WBRNAi00017192 | ||||||
| WBRNAi00014296 | ||||||
| Microarray_results | SMD_M05D6.3 | |||||
| A_12_P133845 | ||||||
| GPL3518_CE03501 | ||||||
| GPL9450_M05D6.3 | ||||||
| cea2.d.34234 | ||||||
| Brief_identification | Tyrosine-protein phosphatase domain-containing protein | Accession_evidence | UniProt | TR:Q21522 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
