WormBase Tree Display for CDS: OVOC4129
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OVOC4129 | SMap | S_parent | Sequence | OVOC_OM2_11 | ||
---|---|---|---|---|---|---|
Structure | Source_exons (19) | |||||
DB_info | DB_remark | OVO-HCF-1 protein; contains similarity to Pfam domains PF13415 (Galactose oxidase, central domain), PF13418 (Galactose oxidase, central domain); contains similarity to Interpro domains IPR003961 (Fibronectin type III), IPR013783 (Immunoglobulin-like fold), IPR036116 (Fibronectin type III superfamily), IPR015915 (Kelch-type beta propeller) | ||||
Origin | From_laboratory | MGM | ||||
Species | Onchocerca volvulus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00240938 | ||||
Corresponding_transcript | OVOC4129.1 | |||||
Corresponding_protein | OVP09394 | |||||
Brief_identification | Host cell factor 2 homolog | Person_evidence | WBPerson2973 | |||
RNASeq_FPKM | WBls:0000104 (15) | |||||
WBls:0000107 | 7.32918 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395 | |||
WBls:0000108 | 29.0561 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392 | |||
31.8236 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393 | ||||
4.53461 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391 | ||||
WBls:0000664 | 15.2674 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396 | |||
31.7528 | From_analysis | RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397 | ||||
Method | curated |