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WormBase Tree Display for CDS: PPA09608

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Name Class

PPA09608SMapS_parentSequencePPA_ChrX
StructureSource_exons163
515730
DB_infoDatabasepristionchus.orgcdsgene-UMS-S293-11.82
TREEFAMTREEFAM_IDTF315116
DB_remarkPPA-SMO-1 protein; contains similarity to Pfam domain PF11976 (Ubiquitin-2 like Rad60 SUMO-like); contains similarity to Interpro domains IPR029071 (Ubiquitin-like domain superfamily), IPR022617 (Rad60/SUMO-like domain), IPR000626 (Ubiquitin-like domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00099162
Corresponding_transcriptPPA09608.1
Corresponding_proteinPP27395
Corresponding_oligo_setGPL14372_Probes_65042
Microarray_resultsGPL14372_Probes_65042
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S293-11.82Curator_confirmedWBPerson4055
Methodcurated