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WormBase Tree Display for CDS: PPA15076

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Name Class

PPA15076SMapS_parentSequencePPA_ChrIII
StructureSource_exons (38)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S66-27.68
DB_remarkPPA-MMCM-1 protein; contains similarity to Pfam domains PF01642 (Methylmalonyl-CoA mutase), PF02310 (B12 binding domain); contains similarity to Interpro domains IPR027267 (AH/BAR domain superfamily), IPR006098 (Methylmalonyl-CoA mutase, alpha chain, catalytic), IPR006099 (Methylmalonyl-CoA mutase, alpha/beta chain, catalytic), IPR016176 (Cobalamin (vitamin B12)-dependent enzyme, catalytic), IPR036724 (Cobalamin-binding domain superfamily), IPR006159 (Methylmalonyl-CoA mutase, C-terminal), IPR006158 (Cobalamin (vitamin B12)-binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00104630
Corresponding_transcriptPPA15076.1
Corresponding_proteinPP72197
Corresponding_oligo_setGPL14372_Probes_46930
GPL14372_Probes_46931
GPL14372_Probes_46934
GPL14372_Probes_46935
GPL14372_Probes_46936
GPL14372_Probes_5796
GPL14372_Probes_5797
GPL14372_Probes_5798
Microarray_resultsGPL14372_Probes_5796
GPL14372_Probes_5797
GPL14372_Probes_5798
GPL14372_Probes_46930
GPL14372_Probes_46931
GPL14372_Probes_46934
GPL14372_Probes_46935
GPL14372_Probes_46936
RNASeq_FPKMWBls:00000322.97815From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001017.03402From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S66-27.68Curator_confirmedWBPerson4055
Methodcurated