WormBase Tree Display for CDS: R74.6
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R74.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R74 | |||
Structure | Source_exons | 1 | 41 | |||
102 | 198 | |||||
250 | 478 | |||||
522 | 652 | |||||
702 | 803 | |||||
851 | 1060 | |||||
1113 | 1192 | |||||
1559 | 1814 | |||||
DB_info | Database | SwissProt | UniProtAcc | P50444 | ||
UniProt | UniProtAcc | P50444 | ||||
UniProt_GCRP | UniProtAcc | P50444 | ||||
AlphaFold | entry | P50444 | ||||
NCBI_protein | GI_number | GI:3879163 | ||||
TREEFAM | TREEFAM_ID | TF105733 | ||||
Protein_id | CHROMOSOME_III | CAA85277 | 1 | |||
DB_remark | PELO-1 protein; contains similarity to Pfam domains PF03463 (eRF1 domain 1), PF03464 (eRF1 domain 2), PF03465 (eRF1 domain 3); contains similarity to Interpro domains IPR038069 (Pelota/DOM34, N-terminal domain), IPR042226 (eRF1, domain 2 superfamily), IPR005141 (eRF1 domain 2), IPR029064 (Ribosomal protein eL30-like superfamily), IPR004405 (Translation release factor pelota), IPR005140 (eRF1 domain 1/Pelota-like), IPR005142 (eRF1 domain 3) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00011280 | ||||
Corresponding_transcript | R74.6.1 | |||||
Corresponding_protein | CE01059 | |||||
Corresponding_PCR_product | TH:303G3 | |||||
TH:334C1 | ||||||
cenix:140-e12 | ||||||
cenix:303-g3 | ||||||
cenix:334-c1 | ||||||
mv_R74.6 | ||||||
sjj_R74.6 | ||||||
Corresponding_oligo_set (17) | ||||||
Matching_cDNA (36) | ||||||
RNAi_result | WBRNAi00006931 | |||||
WBRNAi00017920 | ||||||
WBRNAi00052053 | ||||||
WBRNAi00005284 | ||||||
WBRNAi00052052 | ||||||
WBRNAi00052054 | ||||||
WBRNAi00034979 | ||||||
Microarray_results (20) | ||||||
Brief_identification | Protein pelota homolog | Accession_evidence | UniProt | SP:P50444 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |