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WormBase Tree Display for CDS: R74.6

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Name Class

R74.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceR74
StructureSource_exons141
102198
250478
522652
702803
8511060
11131192
15591814
DB_infoDatabaseSwissProtUniProtAccP50444
UniProtUniProtAccP50444
UniProt_GCRPUniProtAccP50444
AlphaFoldentryP50444
NCBI_proteinGI_numberGI:3879163
TREEFAMTREEFAM_IDTF105733
Protein_idCHROMOSOME_IIICAA852771
DB_remarkPELO-1 protein; contains similarity to Pfam domains PF03463 (eRF1 domain 1), PF03464 (eRF1 domain 2), PF03465 (eRF1 domain 3); contains similarity to Interpro domains IPR038069 (Pelota/DOM34, N-terminal domain), IPR042226 (eRF1, domain 2 superfamily), IPR005141 (eRF1 domain 2), IPR029064 (Ribosomal protein eL30-like superfamily), IPR004405 (Translation release factor pelota), IPR005140 (eRF1 domain 1/Pelota-like), IPR005142 (eRF1 domain 3)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00011280
Corresponding_transcriptR74.6.1
Corresponding_proteinCE01059
Corresponding_PCR_productTH:303G3
TH:334C1
cenix:140-e12
cenix:303-g3
cenix:334-c1
mv_R74.6
sjj_R74.6
Corresponding_oligo_set (17)
Matching_cDNA (36)
RNAi_resultWBRNAi00006931
WBRNAi00017920
WBRNAi00052053
WBRNAi00005284
WBRNAi00052052
WBRNAi00052054
WBRNAi00034979
Microarray_results (20)
Brief_identificationProtein pelota homologAccession_evidenceUniProtSP:P50444
RNASeq_FPKM (74)
Methodcurated