WormBase Tree Display for CDS: Y73B6BL.21b
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Y73B6BL.21b | Evidence | Curator_confirmed | WBPerson4025 | |||
---|---|---|---|---|---|---|
Inferred_automatically | make_isoforms.pl | |||||
SMap | S_parent | Sequence | Y73B6BL | |||
Structure | Source_exons | 1 | 103 | |||
1893 | 1973 | |||||
2939 | 3040 | |||||
3129 | 3274 | |||||
4135 | 4272 | |||||
DB_info | Database | TrEMBL | UniProtAcc | V6CLQ6 | ||
UniProt | UniProtAcc | V6CLQ6 | ||||
AlphaFold | entry | V6CLQ6 | ||||
NCBI_protein | GI_number | GI:919008236 | ||||
Protein_id | CHROMOSOME_IV | CDK13503 | 2 | |||
DB_remark | SFRP-1 protein; contains similarity to Interpro domain IPR008993 (Tissue inhibitor of metalloproteinases-like, OB-fold) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson4025 | ||||
Feature_evidence | WBsf175869 | |||||
Visible | Gene | WBGene00022242 | ||||
Corresponding_transcript | Y73B6BL.21b.1 | |||||
Corresponding_protein | CE50517 | |||||
Corresponding_oligo_set (15) | ||||||
Matching_cDNA | young_adult_Nanopore_Roach_80145 | |||||
L1_Nanopore_Roach_65954 | ||||||
Microarray_results (16) | ||||||
Brief_identification | NTR domain-containing protein | Accession_evidence | UniProt | TR:V6CLQ6 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 01 Dec 2014 00:00:00 | WBPerson4025 | ||||
Remark | [131015 gw3] Autoconversion from AG1201_Y73B6BL.21.T9. Created this isoform based on the SL1 site. | Curator_confirmed | WBPerson4025 | |||
Feature_evidence | WBsf175869 | |||||
[141201 gw3] Changed the acceptor splice site of the third intron because the one that was being used was an alternate slice site with very low usage comapred to the current one. | Curator_confirmed | WBPerson4025 | ||||
Method | curated |