| WBGene00002220 | SMap | S_parent | Sequence | C15C7 |
|---|
| Identity | Version | 2 |
| | Name | CGC_name | gcc-1 | Paper_evidence | WBPaper00046586 |
| | | | | Person_evidence | WBPerson298 |
| | | Sequence_name | C15C7.2 |
| | | Molecular_name | C15C7.2 |
| | | | C15C7.2.1 |
| | | | CE38486 |
| | | Other_name (2) |
| | | Public_name | gcc-1 |
| | DB_info | Database | AceView | gene | XD781 |
| | | | WormQTL | gene | WBGene00002220 |
| | | | WormFlux | gene | WBGene00002220 |
| | | | NDB | locus_tag | CELE_C15C7.2 |
| | | | Panther | gene | CAEEL|WormBase=WBGene00002220|UniProtKB=Q18013 |
| | | | | family | PTHR23157 |
| | | | NCBI | gene | 180606 |
| | | | RefSeq | protein | NM_076142.8 |
| | | | TREEFAM | TREEFAM_ID | TF318590 |
| | | | TrEMBL | UniProtAcc | Q18013 |
| | | | UniProt_GCRP | UniProtAcc | Q18013 |
| | Species | Caenorhabditis elegans |
| | History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace |
| | | | 2 | 25 Mar 2015 16:36:59 | WBPerson2970 | Name_change | CGC_name | gcc-1 |
| | | | | | | | Other_name | klp-8 |
| | Status | Live |
| Gene_info | Biotype | SO:0001217 |
| | Gene_class | gcc |
| | Allele | WBVar01131860 |
| | | WBVar01131861 |
| | | WBVar01131862 |
| | | WBVar01131863 |
| | | WBVar00076927 |
| | | WBVar01131864 |
| | | WBVar01131865 |
| | | WBVar01131866 |
| | | WBVar01131867 |
| | | WBVar02072648 |
| | | WBVar01131868 |
| | | WBVar01131869 |
| | | WBVar01486645 |
| | | WBVar01131870 |
| | | WBVar01131871 |
| | | WBVar02026885 |
| | | WBVar01131872 |
| | | WBVar01131873 |
| | | WBVar01131874 |
| | | WBVar01131875 |
| | | WBVar01131876 |
| | | WBVar01131877 |
| | | WBVar01131878 |
| | | WBVar01131879 |
| | | WBVar01131880 |
| | | WBVar01131881 |
| | | WBVar01131882 |
| | | WBVar01131883 |
| | | WBVar01131884 |
| | | WBVar01131885 |
| | | WBVar01131886 |
| | | WBVar01131887 |
| | | WBVar00498424 |
| | | WBVar00498425 |
| | | WBVar01131888 |
| | | WBVar01131889 |
| | | WBVar00498426 |
| | | WBVar00498427 |
| | | WBVar02050429 |
| | | WBVar01131890 |
| | | WBVar00498428 |
| | | WBVar01703353 |
| | | WBVar00498429 |
| | | WBVar00498430 |
| | | WBVar00498431 |
| | | WBVar00498432 |
| | | WBVar00498433 |
| | | WBVar00498434 |
| | | WBVar00498435 |
| | | WBVar00498436 |
| | | WBVar01757926 |
| | | WBVar01757927 |
| | | WBVar00093690 |
| | | WBVar01757928 |
| | | WBVar01757929 |
| | | WBVar01757930 |
| | | WBVar01757931 |
| | | WBVar01468200 |
| | | WBVar01468201 |
| | | WBVar01468202 |
| | | WBVar02138976 |
| | | WBVar01499636 |
| | | WBVar01830015 |
| | | WBVar01830016 |
| | | WBVar01822417 |
| | | WBVar02152667 |
| | | WBVar01822418 |
| | | WBVar01490282 |
| | | WBVar00296304 |
| | | WBVar02123329 |
| | Legacy_information | [Siddiqui SS ] related to kinesin like protein by sequence similarity. |
| | Strain | WBStrain00002621 |
| | | WBStrain00032635 |
| | RNASeq_FPKM (74) |
| | GO_annotation | 00059939 |
| | | 00059940 |
| | | 00059941 |
| | Contained_in_operon | CEOPX040 |
| | Ortholog (24) |
| | Paralog | WBGene00011503 | Caenorhabditis elegans | From_analysis | Panther |
| | Structured_description | Concise_description | gcc-1 encodes a coiled-coil protein with a C-terminal Golgi-targeting GRIP domain that is the C. elegans ortholog of the human golgin, GCC1; by sequence similarity, GCC-1 is predicted to function in retrograde transport from early endosomes to the trans-Golgi network; large-scale promoter expression studies report that gcc-1 is expressed in multiple tissues including, but not limited to, the pharynx, neurons, hypodermis, and excretory cell. | Paper_evidence | WBPaper00046586 |
| | | | | | WBPaper00030963 |
| | | | | | WBPaper00006525 |
| | | | | | WBPaper00031006 |
| | | | | Curator_confirmed | WBPerson1843 |
| | | | | | WBPerson324 |
| | | | | Date_last_updated | 21 Apr 2015 00:00:00 |
| | | Automated_description | Predicted to be located in Golgi apparatus. Expressed in several structures, including head. | Paper_evidence | WBPaper00065943 |
| | | | | Curator_confirmed | WBPerson324 |
| | | | | | WBPerson37462 |
| | | | | Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase |
| | | | | Date_last_updated | 29 Nov 2023 00:00:00 |
| Molecular_info | Corresponding_CDS | C15C7.2 |
| | Corresponding_CDS_history | C15C7.2:wp142 |
| | Corresponding_transcript | C15C7.2.1 |
| | Other_sequence | Tcir_isotig22567 |
| | | CBC16867_1 |
| | | Tcir_isotig17360 |
| | Associated_feature | WBsf647918 |
| | | WBsf662582 |
| | | WBsf662583 |
| | | WBsf1004533 |
| | | WBsf1004534 |
| | | WBsf1004535 |
| | | WBsf1022574 |
| | | WBsf1022575 |
| | | WBsf235455 |
| Experimental_info | RNAi_result | WBRNAi00040595 | Inferred_automatically | RNAi_primary |
| | | WBRNAi00010783 | Inferred_automatically | RNAi_primary |
| | Expr_pattern | Chronogram1422 |
| | | Expr4831 |
| | | Expr5269 |
| | | Expr15134 |
| | | Expr1012456 |
| | | Expr1031299 |
| | | Expr1144650 |
| | | Expr2011960 |
| | | Expr2030197 |
| | Drives_construct | WBCnstr00002705 |
| | | WBCnstr00004401 |
| | | WBCnstr00012262 |
| | | WBCnstr00037959 |
| | Construct_product | WBCnstr00037959 |
| | Microarray_results (19) |
| | Expression_cluster | WBPaper00036375:enriched_in_PVD_OLL |
| | | WBPaper00037950:A-class-motor-neurons_L2-larva_expressed |
| | | WBPaper00037950:all-neurons_L1-larva_expressed |
| | | WBPaper00037950:all-neurons_L2-larva_expressed |
| | | WBPaper00037950:AVA-neuron_embryo_enriched |
| | | WBPaper00037950:AVA-neuron_L1-larva_expressed |
| | | WBPaper00037950:AVE-neuron_L1-larva_expressed |
| | | WBPaper00037950:BAG-neuron_blastula-embryo_expressed |
| | | WBPaper00037950:bodywall-muscle_L1-larva_expressed |
| | | WBPaper00037950:bodywall-muscle_L2-larva_expressed |
| | | WBPaper00037950:coelomocytes_embryo_enriched |
| | | WBPaper00037950:coelomocytes_L1-larva_expressed |
| | | WBPaper00037950:coelomocytes_L2-larva_expressed |
| | | WBPaper00037950:dopaminergic-neurons_embryo_enriched |
| | | WBPaper00037950:dopaminergic-neurons_L1-larva_expressed |
| | | WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed |
| | | WBPaper00037950:excretory-cell_L2-larva_expressed |
| | | WBPaper00037950:GABAergic-motor-neurons_embryo_enriched |
| | | WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed |
| | | WBPaper00037950:germline-precursors_blastula-embryo_expressed |
| | | WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed |
| | | WBPaper00037950:hypodermis_L1-larva_expressed |
| | | WBPaper00037950:hypodermis_L3-L4-larva_expressed |
| | | WBPaper00037950:hypodermis_larva_enriched |
| | | WBPaper00037950:intestine_L1-larva_expressed |
| | | WBPaper00037950:intestine_L2-larva_expressed |
| | | WBPaper00037950:pharyngeal-muscle_L1-larva_expressed |
| | | WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed |
| | | WBPaper00040221:DAF-12_target_ALF4 |
| | | WBPaper00044501:gld-1_let-7_regulated |
| | | WBPaper00044736:flat_dev_expression |
| | | WBPaper00045521:Oogenic |
| | | WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h |
| | | WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h |
| | | WBPaper00048988:neuron_expressed |
| | | WBPaper00049545:jmjd-3.1(+)_upregulated |
| | | WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult |
| | | WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult |
| | | WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult |
| | | WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult |
| | | WBPaper00050990:intestine_enriched |
| | | WBPaper00050990:intestine_expressed |
| | | WBPaper00051265:F4_hrde-1(tm1200)_upregulated |
| | | WBPaper00051265:F4_morc-1(tm6048)_upregulated |
| | | WBPaper00052884:emb-4(hc60)_upregulated |
| | | WBPaper00053302:stavudine_24h_regulated |
| | | WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII |
| | | WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq |
| | | WBPaper00053321:mes-2(RNAi)_upregulated_fed-L1_Truseq |
| | | WBPaper00053321:mes-4(RNAi)_upregulated_fed-L1_Truseq |
| | | WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq |
| | | WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq |
| | | WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq |
| | | WBPaper00053388:dauer_regulated_Cluster6 |
| | | WBPaper00055354:eat-2(ad1116)_downregulated |
| | | WBPaper00055971:nhl-2(ok818)_25C_upregulated |
| | | WBPaper00056218:daf-16(mu86)_upregulated_Day7 |
| | | WBPaper00057083:daf-2(e1370)rsks-1(ok1255)_post-transcriptional_downregulated |
| | | WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated |
| | | WBPaper00057288:iff-1(RNAi)_downregulated_transcript |
| | | WBPaper00058691:cfp-1(tm6369)_downregulated |
| | | WBPaper00058691:set-2(bn129)_downregulated |
| | | WBPaper00061340:Arcade_cell_anterior_and_posterior |
| | | WBPaper00061340:Parents_of_Y_DA6_DA7_DA9 |
| | | WBPaper00061340:Parent_of_g1P_I3 |
| | | WBPaper00061527:ldb-1_2877-scd-1_3086 |
| | | WBPaper00061527:nrde-3-tra-4_10484 |
| | | WBPaper00061902:camt-1(ok515)_regulated_RMG |
| | | WBPaper00062325:muscle_depleted_coding-RNA |
| | | WBPaper00062590:Aging_upregulated_intestine |
| | | WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141) |
| | | WBPaper00064315:mes-3(bn199)_upregulated_EGCs |
| | | WBPaper00064315:mes-4(bn73)_upregulated_EGCs |
| | | WBPaper00064315:mes-4(bn73)_upregulated_PGCs |
| | | WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs |
| | | WBPaper00065373:sek-1(km4)_upregulated_cisplatin |
| | | WBPaper00065975:P-body_vs_oocyte_enriched |
| | | WBPaper00065975:P-body_vs_WholeAnimal_enriched |
| | | WBPaper00025032:cluster_7 |
| | | WBPaper00025032:cluster_185 |
| | | WBPaper00025141:N2_Expressed_Genes |
| | | WBPaper00025141:unc-4::GFP_Expressed_Genes |
| | | WBPaper00026929:sir-2.1_overexpression_regulated |
| | | WBPaper00031003:0hr_muscle_depleted |
| | | WBPaper00031003:total_muscle_depleted |
| | | WBPaper00035905:FBF-1_Associated |
| | | WBPaper00036286:Pattern_F |
| | | WBPaper00040210:Diazinon_24C_regulated |
| | | WBPaper00040823:alg-1(gk214)_downregulated |
| | | WBPaper00041606:CE_X.nematophila_regulated |
| | | WBPaper00042331:a-SWCNTs_downregulated |
| | | WBPaper00045263:0.1mM-paraquat_upregulated |
| | | WBPaper00045263:isp-1(qm150)_upregulated |
| | | WBPaper00045263:nuo-6(qm200)_upregulated |
| | | WBPaper00045263:ProLongevity-mtROS_upregulated |
| | | WBPaper00047070:N2_UV_downregulated |
| | | WBPaper00048989:N2_rapamycin_downregulated |
| | Interaction | WBInteraction000030969 |
| | | WBInteraction000216603 |
| | | WBInteraction000320396 |
| | | WBInteraction000362652 |
| | | WBInteraction000512401 |
| | | WBInteraction000543034 |
| Map_info | Map | X | Position | -11.9123 | Error | 0.110758 |
| | Positive | Positive_clone | C15C7 | Inferred_automatically | From sequence, transcript, pseudogene data |
| | | | Y43F4 |
| | Pseudo_map_position |
| Reference | WBPaper00010295 |
| | WBPaper00018069 |
| | WBPaper00018596 |
| | WBPaper00019563 |
| | WBPaper00030963 |
| | WBPaper00038491 |
| | WBPaper00046586 |
| Remark | Sequence connection from [Siddiqui SS], 02/06/11 krb. |
| | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission |
| | C15C7.2, based on sequence similarity and subcellular localization is a GRIP domain containing Trans-Golgi Network protein of the Golgin family, not a kinesin; thus klp-8 is not an appropriate name | Paper_evidence | WBPaper00046586 |
| Method | Gene |
