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WormBase Tree Display for Gene: WBGene00000425

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Name Class

WBGene00000425SMapS_parentSequenceZK512
IdentityVersion1
NameCGC_nameced-11Person_evidenceWBPerson261
Sequence_nameZK512.3
Molecular_nameZK512.3
ZK512.3.1
CE00409
Other_nameCELE_ZK512.3Accession_evidenceNDBBX284603
Public_nameced-11
DB_infoDatabaseAceViewgene3K213
WormQTLgeneWBGene00000425
WormFluxgeneWBGene00000425
NDBlocus_tagCELE_ZK512.3
PanthergeneCAEEL|WormBase=WBGene00000425|UniProtKB=P34641
familyPTHR13800
NCBIgene176288
RefSeqproteinNM_066620.6
SwissProtUniProtAccP34641
TREEFAMTREEFAM_IDTF321453
UniProt_GCRPUniProtAccP34641
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classced
AlleleWBVar00090586
WBVar00090569
WBVar02148593
WBVar00090587
WBVar00090585
WBVar00090570
WBVar01500260
WBVar00848672
WBVar00848673
WBVar00848674
WBVar00848675
WBVar00848676
WBVar00848677
WBVar00848678
WBVar00848679
WBVar00848680
WBVar00848681
WBVar00848682
WBVar00848683
WBVar00848684
WBVar00848685
WBVar00848686
WBVar00848687
WBVar01629218
WBVar00848688
WBVar01629219
WBVar00848689
WBVar00848690
WBVar00848691
WBVar00848692
WBVar00848693
WBVar00848694
WBVar00848695
WBVar00848696
WBVar00848697
WBVar00848698
WBVar00848699
WBVar00848700
WBVar00848701
WBVar00848702
WBVar00848703
WBVar00848704
WBVar01499774
WBVar01416193
WBVar01645805
WBVar01645806
WBVar01266931
WBVar00256060
WBVar00564554
WBVar01480161
WBVar00404711
WBVar00251145
WBVar00404712
WBVar00404713
WBVar00404714
WBVar00404715
WBVar00404716
WBVar00404717
WBVar00257051
WBVar00404718
WBVar00404719
WBVar00404720
WBVar01447399
WBVar01893638
WBVar00215390
WBVar01489758
WBVar01492337
WBVar01492338
Legacy_information[Stanfield G] abnormal programmed cell death corpses
[C.elegansII] n2744 : abnormal programmed cell death corpses OA3: n2745, n2832, n2833, n2834Cloned: encodes predicted novel protein. [MT]
RNASeq_FPKM (74)
GO_annotation00043643
00043644
00043645
00043646
00043647
00043648
OrthologWBGene00055164Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00029124Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00159603Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00127690Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00208944Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00227742Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g5798Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5660Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g2462Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20126Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3345Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g17639Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16106Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1805Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6403Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9093Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00096.g4219Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-ced-11Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold611.g5854Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01713.g22677Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07486Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009359Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04889Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20340Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30259820Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8550Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00207053Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217554Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00245936Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00278184Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00291331Trichuris murisFrom_analysisWormBase-Compara
WBGene00291719Trichuris murisFrom_analysisWormBase-Compara
WBGene00291720Trichuris murisFrom_analysisWormBase-Compara
WBGene00296752Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00001651Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001795Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001796Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004149Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008731Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020972Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021404Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021408Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionThe ced-11 gene encodes a predicted transmembrane ion channel related to the long transient receptor potential channel (LTRPC) subfamily of TRP channels found in Drosophila and mammals; CED-11 functions as a downstream effector in the programmed cell death pathway and may play a role in affecting the morphological changes seen in the nucleus, cytoplasm, and plasma membrane of apoptotic cells.Paper_evidenceWBPaper00004159
WBPaper00022068
WBPaper00022724
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable monoatomic cation channel activity. Involved in apoptotic process. Predicted to be located in membrane. Expressed in apoptotic cell; head; hypodermis; and tail.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK512.3
Corresponding_transcriptZK512.3.1
Other_sequence (14)
Associated_featureWBsf659389
WBsf659390
WBsf993579
WBsf1015548
WBsf225522
WBsf225523
WBsf225524
Experimental_infoRNAi_resultWBRNAi00002366Inferred_automaticallyRNAi_primary
WBRNAi00038317Inferred_automaticallyRNAi_primary
WBRNAi00059472Inferred_automaticallyRNAi_primary
WBRNAi00006142Inferred_automaticallyRNAi_primary
Expr_patternExpr2040
Expr13488
Expr1011305
Expr1030241
Expr1162895
Expr2009842
Expr2028082
Drives_constructWBCnstr00037551
Construct_productWBCnstr00037551
Microarray_results (21)
Expression_cluster (189)
Interaction (11)
Map_infoMapIIIPosition0.165457Error0.00081
Well_ordered
PositivePositive_cloneC33D7
ZK512Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeNegative_cloneC37G7
ZK507
Mapping_dataMulti_point2760
2761
2762
2763
2764
2765
2766
Reference (16)
MethodGene