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WormBase Tree Display for Gene: WBGene00004903

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Name Class

WBGene00004903EvidenceCGC_data_submission
SMapS_parentSequenceY46G5A
IdentityVersion2
NameCGC_namesnf-4Person_evidenceWBPerson508
Sequence_nameY46G5A.25
Molecular_nameY46G5A.25
Other_nameCELE_Y46G5A.25Accession_evidenceNDBBX284602
Public_namesnf-4
DB_infoDatabaseAceViewgene2N124
WormQTLgeneWBGene00004903
NDBlocus_tagCELE_Y46G5A.25
NCBIgene174919
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:36WBPerson1971EventImportedInitial conversion from geneace
227 Nov 2008 12:11:21WBPerson1983EventChanged_classCDSPseudogene
StatusLive
Gene_infoBiotypeSO:0000336
Gene_classsnf
AlleleWBVar00381372
WBVar00381373
WBVar01983188
WBVar00381374
WBVar01499702
WBVar00381375
WBVar01983189
WBVar02007149
WBVar01560333
WBVar01560334
WBVar01560335
WBVar00230755
WBVar00230756
WBVar00230757
WBVar00230758
WBVar00230759
WBVar00230760
WBVar01498435
WBVar00230762
WBVar00257099
WBVar02130964
WBVar01498828
WBVar01498829
WBVar02121569
WBVar01400638
WBVar02121387
WBVar01499956
WBVar01936344
WBVar01936345
WBVar01936346
WBVar01605803
WBVar01605804
WBVar01836654
WBVar02077220
WBVar00778053
WBVar00778054
WBVar00778055
WBVar00778056
WBVar00778057
WBVar00778058
WBVar00778059
WBVar00778060
WBVar00778061
WBVar00778062
WBVar00264916
WBVar00778063
WBVar00778064
WBVar00778065
WBVar00778066
WBVar00778067
WBVar00778068
WBVar00778069
WBVar01949520
WBVar00778070
WBVar01949521
WBVar00778071
WBVar00238849
WBVar00778072
WBVar00778073
WBVar00238850
WBVar00778074
WBVar00778075
WBVar01666736
WBVar01666737
WBVar00091204
WBVar01441107
WBVar01441108
WBVar01441109
WBVar01505563
WBVar01505564
WBVar01498941
WBVar01248956
WBVar01248957
WBVar01248958
WBVar00002703
WBVar00091784
WBVar00106399
WBVar00002708
WBVar00106401
WBVar00106402
WBVar00381370
WBVar00106403
WBVar00106404
WBVar00381371
StrainWBStrain00031458
RNASeq_FPKM (74)
ParalogWBGene00004901Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionEnriched in male based on RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by fourteen chemicals including hydrogen sulfide; Ethanol; and methylmercuric chloride based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS_historyY46G5A.25:wp124
Y46G5A.25:wp197
Corresponding_pseudogeneY46G5A.25
Other_sequenceCR10627
DVC00040_1
CRC10750_1
EV854162.1
Associated_featureWBsf224112
Experimental_infoMicroarray_results (12)
Expression_cluster (74)
InteractionWBInteraction000274023
WBInteraction000383367
WBInteraction000395119
WBInteraction000401019
WBInteraction000406673
WBInteraction000416360
WBInteraction000445312
WBInteraction000463741
WBInteraction000473990
WBInteraction000475069
Map_infoMapIIPosition11.4015Error0.060723
PositivePositive_cloneY46G5AInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4673
4674
5028
Pseudo_map_position
ReferenceWBPaper00015781
WBPaper00043908
RemarkSequence connection from [Rand JB]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene