WormBase Tree Display for Variation: WBVar00091784
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WBVar00091784 | Name | Public_name | ok496 | ||
---|---|---|---|---|---|
Other_name | Y46G5A.25:n.308_749del | ||||
HGVSg | CHROMOSOME_II:g.12834738_12835473del | ||||
Sequence_details | SMap | S_parent | Sequence | Y46G5A | |
Flanking_sequences | aagggcttcgcaccattacatcgtttttga | ccggcgtctcacaggaccccctttgcattg | |||
Mapping_target | Y46G5A | ||||
Type_of_mutation | Deletion | ||||
PCR_product | OK496_external | ||||
OK496_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00031458 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00004903 | |||
Pseudogene | Y46G5A.25 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,non_coding_transcript_exon_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | Y46G5A.25:n.308_749del | ||||
cDNA_position | 308-749 | ||||
Intron_number | 2-3/9 | ||||
Exon_number | 2-4/10 | ||||
Isolation | Mutagen | UV/TMP | |||
Genetics | Mapping_data | In_multi_point | 4673 | ||
Description | Phenotype (16) | ||||
Reference | WBPaper00043908 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |