WormBase Tree Display for Gene: WBGene00012972

WBGene00012972 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 2
    Name: CGC_name: rsa-2 Person_evidence: WBPerson283
      Sequence_name: Y48A6B.11
      Molecular_name: Y48A6B.11a
        Y48A6B.11a.1
        CE24379
        Y48A6B.11c
        CE54304
        Y48A6B.11c.1
      Other_name: CELE_Y48A6B.11 Accession_evidence: NDB BX284603
      Public_name: rsa-2
    DB_info: Database: AceView gene 3M157
        WormQTL gene WBGene00012972
        WormFlux gene WBGene00012972
        NDB locus_tag CELE_Y48A6B.11
        NCBI gene 176536
        RefSeq protein NM_001395774.1
            NM_001027715.3
        SwissProt UniProtAcc G5EFV3
        TrEMBL UniProtAcc A0A7R9SUN5
        UniProt_GCRP UniProtAcc G5EFV3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Feb 2007 09:34:11 WBPerson2970 Name_change: CGC_name: rsa-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rsa
    Allele: WBVar00602485
      WBVar01500260
      WBVar01507667
      WBVar00322209
      WBVar01416465
      WBVar00408652
      WBVar00408653
      WBVar00408654
      WBVar00408655
      WBVar00408656
      WBVar00408657
      WBVar00408658
      WBVar00408659
      WBVar00408660
      WBVar00408661
      WBVar00408662
      WBVar00408663
      WBVar00860302
      WBVar00860303
      WBVar00860304
      WBVar00860305
      WBVar00860306
      WBVar00860307
      WBVar00860308
      WBVar00860309
      WBVar00860310
      WBVar00860311
      WBVar00860312
      WBVar00860313
      WBVar01499774
      WBVar00860314
      WBVar00860315
      WBVar00860316
      WBVar00860317
      WBVar01397499
      WBVar00860318
      WBVar00860319
      WBVar01397500
      WBVar00860320
      WBVar00860321
      WBVar00860322
      WBVar00860323
      WBVar00860324
      WBVar00860325
      WBVar00860326
      WBVar00860327
      WBVar00860328
      WBVar00860329
      WBVar00860330
      WBVar00860331
      WBVar00860332
      WBVar00860333
      WBVar00860334
      WBVar00860335
      WBVar00860336
      WBVar00860337
      WBVar00860338
      WBVar00860339
      WBVar00860340
      WBVar00860341
      WBVar00860342
      WBVar00860343
      WBVar00860344
      WBVar00860345
      WBVar00251834
      WBVar00320364
      WBVar01269098
      WBVar01269099
      WBVar01269100
      WBVar01269101
      WBVar01269102
      WBVar01269103
      WBVar01269104
      WBVar01269105
      WBVar01269107
      WBVar01269108
      WBVar01269109
      WBVar01269110
      WBVar01269111
      WBVar02146258
      WBVar01269112
      WBVar01269113
      WBVar02132723
      WBVar01269114
      WBVar02132724
      WBVar01984107
      WBVar01491578
      WBVar00179436
      WBVar00179437
      WBVar01401858
      WBVar01963148
      WBVar01491043
      WBVar00318510
    RNASeq_FPKM (74)
    GO_annotation (14)
    Contained_in_operon: CEOP3716
    Ortholog (19)
    Structured_description: Automated_description: Enables beta-catenin binding activity and protein-macromolecule adaptor activity. Involved in embryonic digestive tract development; mitotic spindle organization; and protein localization to organelle. Located in centrosome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y48A6B.11a
      Y48A6B.11c
    Corresponding_CDS_history: Y48A6B.11b:wp279
    Corresponding_transcript: Y48A6B.11a.1
      Y48A6B.11c.1
    Other_sequence: CRC04471_1
      CBC09730_1
      CRC04382_1
      CR03366
      MH04799
    Associated_feature: WBsf645599
      WBsf659564
      WBsf659565
      WBsf981584
      WBsf994255
      WBsf1015919
  Experimental_info: RNAi_result: WBRNAi00009347 Inferred_automatically: RNAi_primary
      WBRNAi00026747 Inferred_automatically: RNAi_primary
      WBRNAi00056859 Inferred_automatically: RNAi_primary
      WBRNAi00037215 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4520
      Expr4521
      Expr12866
      Expr1023560
      Expr1035752
      Expr1160312
      Expr2015547
      Expr2033782
    Drives_construct: WBCnstr00022914
    Construct_product: WBCnstr00022914
    Antibody (3)
    Microarray_results (25)
    Expression_cluster (183)
    Interaction (35)
  Map_info: Map: III Position: 5.88345 Error: 0.005495
    Positive: Positive_clone: Y48A6B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028993
    WBPaper00032092
    WBPaper00043631
    WBPaper00045606
    WBPaper00046623
    WBPaper00047475
    WBPaper00048324
    WBPaper00051102
    WBPaper00052241
    WBPaper00057728
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene