WormBase Tree Display for Gene: WBGene00006843

WBGene00006843 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 1
    Name: CGC_name: unc-119 Person_evidence: WBPerson261
      Sequence_name: M142.1
      Molecular_name: M142.1a
        M142.1a.1
        CE06203
        M142.1b
        CE43523
        M142.1c
        CE44343
        M142.1b.1
        M142.1c.1
      Other_name: 3L997 Inferred_automatically
        CELE_M142.1 Accession_evidence: NDB BX284603
      Public_name: unc-119
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    Allele (132)
    Possibly_affected_by: WBVar02152819
      WBVar02153069
      WBVar02153167
      WBVar02153169
      WBVar02153170
      WBVar02153171
      WBVar02153173
      WBVar02154063
      WBVar02158600
      WBVar02158612
    Legacy_information: See also e2498
      [Maduro & Pilgrim] e2498::Tc1: strong unc, almost paralyzed adults, dumpyish, tends to curl; daf-d (daf-7 suppressible), weak FITC uptake; partially Egl; similar phenotype to eDf2; eDp6. ES3 (all stages), ME0. NA4 (ed3op, ed4oc, ed9: all similar to e2498, all putative nulls). Ref. DP.
      [C.elegansII] e2498::Tc1 : severe Unc, almost paralysed adults,dumpyish, tends to curl; Daf-d, partial Egl, partial Dyf. Normal muscle ultrastructure.ES3. ME0. OA3: ed3op, ed4oc, ed9 (all similar). Cloned: encodes predicted 219 aa novel protein. unc-119:GFP expressed extensively in axons. [Maduro & Pilgrim 1995]
    Strain (2313)
    RNASeq_FPKM (74)
    GO_annotation (22)
    Ortholog: WBGene00055838 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00037738 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144178 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00105848 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00124459 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00213697 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00231639 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4395 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g695 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7541 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18570 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22581 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24881 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12200 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3833 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g28010 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22945 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-unc-119 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7272 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00622.g13662 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11478 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010382 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g11632 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30110110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8959 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245816 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00260729 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302749 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0025549 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030219-130 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-030131-7635 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-090930-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050201-2 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:12565 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:16488 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1328357 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2147162 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:3942 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00003966 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description (2)
  Disease_info: Potential_model: DOID:0111987 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12565)
      DOID:0050572 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12565)
  Molecular_info: Corresponding_CDS: M142.1a
      M142.1b
      M142.1c
    Corresponding_transcript: M142.1a.1
      M142.1b.1
      M142.1c.1
    Other_sequence (63)
    Associated_feature (12)
  Experimental_info: RNAi_result (13)
    Expr_pattern (18)
    Drives_construct (109)
    Construct_product (41)
    Antibody: WBAntibody00000421
      WBAntibody00002511
      WBAntibody00002695
    Microarray_results (21)
    Expression_cluster (150)
    Interaction (303)
  Map_info: Map: III Position: 5.58925 Error: 0.00446
    Well_ordered
    Positive: Positive_clone: C27F7
        C44B9
        M142 Inferred_automatically: From sequence, transcript, pseudogene data
        Y39A1
        Y60D9
    Negative: Negative_clone: K02B6
        K11D9
        T27G1
    Mapping_data: 2_point: 4972
        4973
        4974
      Multi_point: 1715
        1716
        1717
      Pos_neg_data: 4970
        4971
  Reference (258)
  Remark: a sequence search shows strong similarity to C27H5.1 (II): a 92 a.a. region shows 26% identity, 51% similarity to UNC-119.
  Method: Gene