WormBase Tree Display for Gene: WBGene00227604

WBGene00227604 SMap: S_parent: Sequence: Bm_v4_Chr1_scaffold_001
  Identity: Version: 6
    Name: CGC_name: Bma-tax-4 From_analysis: Inferred_from_orthology
      Sequence_name: Bm7343
      Molecular_name: Bm7343
        Bm7343.1
        BM48582
      Other_name: Bm-tax-4
        TAG7343 Curator_confirmed: WBPerson4055
        Bm1_05590A Curator_confirmed: WBPerson4055
        Bm1_05590 Person_evidence: WBPerson5841
      Public_name: Bma-tax-4
    Species: Brugia malayi
    History: Version_change: 1 10 Dec 2012 14:43:25 WBPerson4055 Event: Created
        2 05 Jul 2013 11:43:21 WBPerson4055 Name_change: CGC_name: Bma-tax-4
                Other_name: Bm-tax-4
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Bma-tax-4
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Bma-tax-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tax
    RNASeq_FPKM: WBls:0000097 0.221069 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
        0.277047 From_analysis: RNASeq.brugia.WBls:0000097.control_mean
        0.325559 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        1.33672 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
        0 From_analysis: RNASeq.brugia.WBls:0000097.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
      WBls:0000078 0.132973 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
        0.346037 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        0.368862 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
        0.489425 From_analysis: RNASeq.brugia.WBls:0000078.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
        1.17587 From_analysis: RNASeq.brugia.WBls:0000078.control_mean
        1.89222 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
        2.46411 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        2.53748 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
      WBls:0000080 0.348812 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
        0.545182 From_analysis: RNASeq.brugia.WBls:0000080.control_mean
        0.589699 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
        0.595244 From_analysis: RNASeq.brugia.WBls:0000080.control_median
        0.600789 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        0.641429 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
      WBls:0000081 (22)
      WBls:0000082 0.028179 From_analysis: RNASeq.brugia.WBls:0000082.control_mean
        0.03219 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        0.108705 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
        0 From_analysis: RNASeq.brugia.WBls:0000082.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
      WBls:0000083 (66)
      WBls:0000092 1.71547 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
        1.94669 From_analysis: RNASeq.brugia.WBls:0000092.control_mean
            RNASeq.brugia.WBls:0000092.control_median
        2.17791 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
      WBls:0000094 0.758333 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
        0.982987 From_analysis: RNASeq.brugia.WBls:0000094.control_mean
            RNASeq.brugia.WBls:0000094.control_median
        1.20764 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
      WBls:0000101 0.431187 From_analysis: RNASeq.brugia.total_over_all_stages.control_median
        0.844617 From_analysis: RNASeq.brugia.total_over_all_stages.control_mean
      WBls:0000662 2.01241 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
        2.29323 From_analysis: RNASeq.brugia.WBls:0000662.control_mean
            RNASeq.brugia.WBls:0000662.control_median
        2.57404 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
      WBls:0000663 1.25796 From_analysis: RNASeq.brugia.WBls:0000663.control_mean
            RNASeq.brugia.WBls:0000663.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
    GO_annotation: 00246376
      00246377
      00246378
      00246379
      00246380
      00246381
    Ortholog: WBGene00147705 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00029133 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CBOVI.g4297 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3188 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2456 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20100 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3331 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5774 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16092 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6362 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13787 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g18733 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25082 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g26804 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g9086 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00671.g13331 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_14064.g24503 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-tax-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18428 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01349.g20292 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_01589.g21923 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07472 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009373 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g5990 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30262300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00006526 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00055150 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00091942 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00128739 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216335 Caenorhabditis japonica From_analysis: WormBase-Compara
      chrIII_pilon.g8563 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244980 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262550 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287342 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00222745 Brugia malayi From_analysis: WormBase-Compara
      WBGene00223665 Brugia malayi From_analysis: WormBase-Compara
      WBGene00224134 Brugia malayi From_analysis: WormBase-Compara
      WBGene00227409 Brugia malayi From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans tax-4. In C. elegans, tax-4 is involved in several processes, including detection of stimulus; positive regulation of macromolecule biosynthetic process; and response to temperature stimulus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Bm7343
    Corresponding_CDS_history: Bm7343:bm271
    Corresponding_transcript: Bm7343.1
    Other_sequence (27)
  Experimental_info: Expression_cluster: WBPaper00051007:downregulated_M120_vs_M30
  Reference: WBPaper00045439
    WBPaper00048750
    WBPaper00059779
  Remark: [190208 pad] The CGC name Bma-tax-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Bma-tax-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene