Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00029133

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00029133SMapS_parentSequencecb25.fpc0201
IdentityVersion2
NameCGC_nameCbr-tax-4From_analysisInferred_from_orthology
Sequence_nameCBG06949
Molecular_nameCBG06949
CBG06949.1
CBP41257
Other_nameCBG_06949Accession_evidenceNDBHE601347
Public_nameCbr-tax-4
DB_infoDatabaseNDBlocus_tagCBG_06949
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tax-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtax
RNASeq_FPKMWBls:00000020.569449From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
0.687577From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.743428From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.973258From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
0.177269From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
0.601888From_analysisRNASeq.briggsae.WBls:0000002.control_mean
0.628513From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.081667From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.163335From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
0.054445From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000040.597872From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
1.01133From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
1.42479From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
0.409894From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.513318From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
0.689731From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.727121From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000270.101709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.604805From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.819668From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.75249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
1.11167From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.17865From_analysisRNASeq.briggsae.WBls:0000027.control_median
1.98767From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000350.920992From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.505391From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.637511From_analysisRNASeq.briggsae.WBls:0000038.control_median
0.769631From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
0.83559From_analysisRNASeq.briggsae.WBls:0000038.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
2.06734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:00000410.012427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
0.047555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.085135From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.12237From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.122716From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.306783From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
0.200099From_analysisRNASeq.briggsae.WBls:0000041.control_mean
0.209167From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.295618From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
0.415494From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:00000630.099397From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.153915From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.154476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.188593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.128476From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.154196From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.27387From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001010.505391From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.717521From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
0.412694From_analysisRNASeq.briggsae.total_over_all_stages.control_median
0.67292From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132574
00132575
00132576
00132577
00132578
00132579
Ortholog (34)
ParalogWBGene00028880Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032686Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033375Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036641Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039233Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041056Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00045213Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans tax-4. In C. elegans, tax-4 is involved in several processes, including detection of stimulus; positive regulation of macromolecule biosynthetic process; and response to temperature stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06949
Corresponding_CDS_historyCBG06949:bp194
CBG06949:bp255
Corresponding_transcriptCBG06949.1
Other_sequence (17)
Experimental_infoExpr_patternExpr1053541
Microarray_resultsGPL8303_CB6_WBGene00029133_A
GPL8303_CB6_WBGene00029133_B
GPL14143_CBG06949_1560-1619_0.911_11_B
GPL14143_CBG06949_1780-1839_0.938_3_C
GPL14143_CBG06949_1967-2026_0.818_91_A
MethodGene