WormBase Tree Display for Gene: WBGene00001514

WBGene00001514 SMap: S_parent: Sequence: C05D2
  Identity: Version: 2
    Name: CGC_name: xnd-1 Person_evidence: WBPerson36
            WBPerson2156
      Sequence_name: C05D2.5
      Molecular_name: C05D2.5
        C05D2.5.1
        CE26863
      Other_name: gak-1 Person_evidence: WBPerson36
        CELE_C05D2.5 Accession_evidence: NDB BX284603
      Public_name: xnd-1
    DB_info: Database: AceView gene 3G695
        WormQTL gene WBGene00001514
        WormFlux gene WBGene00001514
        NDB locus_tag CELE_C05D2.5
        NCBI gene 175776
        RefSeq protein NM_065806.9
        TREEFAM TREEFAM_ID TF320630
        TrEMBL UniProtAcc O45134
        UniProt_GCRP UniProtAcc O45134
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 15 Sep 2008 11:24:05 WBPerson2970 Name_change: CGC_name: xnd-1
                Other_name: gak-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: xnd
    Allele (41)
    Strain: WBStrain00031581
      WBStrain00031582
    RNASeq_FPKM (74)
    Ortholog: WBGene00055638 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00030650 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00145078 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00178536 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g4696 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g20742 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9608 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15160 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14115 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15962 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7282 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20273 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19695 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-xnd-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold626.g6367 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold626.g6370 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03344.g29878 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18521 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010579 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30132100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7750 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00021890 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Expressed in several structures, including P4; Z2; Z3; germ line; and pharynx. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05D2.5
    Corresponding_transcript: C05D2.5.1
    Other_sequence: CBC03002_1
      CJC15952_1
    Associated_feature: WBsf658964
      WBsf978814
      WBsf992451
      WBsf224968
    Transcription_factor: WBTranscriptionFactor001128
  Experimental_info: RNAi_result (18)
    Expr_pattern: Expr7413
      Expr9146
      Expr13418
      Expr13419
      Expr1013036
      Expr1030910
      Expr1143844
      Expr2018097
      Expr2036235
    Drives_construct: WBCnstr00012556
      WBCnstr00037972
    Construct_product: WBCnstr00020942
      WBCnstr00037972
    Antibody: WBAntibody00002160
      WBAntibody00002161
    Microarray_results (21)
    Expression_cluster (160)
    Interaction (138)
  Map_info: Map: III Position: -1.49264 Error: 0.007921
    Positive: Positive_clone: C05D2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4332
    Pseudo_map_position
  Reference: WBPaper00015547
    WBPaper00017567
    WBPaper00018074
    WBPaper00023343
    WBPaper00028029
    WBPaper00028057
    WBPaper00033993
    WBPaper00034402
    WBPaper00034408
    WBPaper00034794
    WBPaper00037683
    WBPaper00042936
    WBPaper00043275
    WBPaper00043624
    WBPaper00043758
    WBPaper00046534
    WBPaper00048238
    WBPaper00048566
    WBPaper00049818
    WBPaper00050180
    WBPaper00057798
    WBPaper00060563
    WBPaper00062587
    WBPaper00063123
    WBPaper00064419
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene