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WormBase Tree Display for Gene: WBGene00190538

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Name Class

WBGene00190538SMapS_parentSequenceCbre_Contig3
IdentityVersion2
NameCGC_nameCbn-unc-103From_analysisInferred_from_orthology
Sequence_nameCBN28573
Molecular_nameCBN28573
CBN28573.1
CN33593
Public_nameCbn-unc-103
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-unc-103
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000020.30207From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0.44751From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
0.600347From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
0.622865From_analysisRNASeq.brenneri.WBls:0000002.control_median
0.645384From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
1.14168From_analysisRNASeq.brenneri.WBls:0000002.control_mean
1.40553From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
1.57986From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
3.11016From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
3.3259From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
WBls:00000041.57406From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
5.47807From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
9.38207From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:000002415.1353From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
18.7082From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
20.6197From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
22.25From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
23.0613From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:00000385.17633From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
5.33167From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
5.48701From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (18)
WBls:00001013.00074From_analysisRNASeq.brenneri.total_over_all_stages.control_median
3.6189From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00226155
00226156
00226157
00226158
00226159
00226160
OrthologWBGene00006830Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00039233Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00061624Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00136729Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g4763Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1334Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21131Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5400Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1373Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10526Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3939Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20877Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1061Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20901Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00051.g2635Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-103Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20760Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01822.g23351Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07249Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008889Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08075Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17993Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30000300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00222745Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g7375Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00244951Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00278424Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00261226Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292680Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00160763Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00141301Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00142813Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00147705Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00156108Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00191033Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192193Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00193894Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-103. In C. elegans, unc-103 is involved in mating behavior and regulation of muscle contraction.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN28573
Corresponding_transcriptCBN28573.1
Other_sequenceJO470622.1
JI174178.1
MI01833
MIC02221_1
MI04482
JI175606.1
Experimental_infoMicroarray_resultsGPL14142_CBN28573_1700-1759_0.910_8_C
GPL14142_CBN28573_1951-2010_0.544_265_B
GPL14142_CBN28573_2375-2434_0.488_311_A
MethodGene