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WormBase Tree Display for Gene: WBGene00061174

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Name Class

WBGene00061174SMapS_parentSequenceCrem_Contig22
IdentityVersion3
NameCGC_nameCre-sac-2From_analysisInferred_from_orthology
Sequence_nameCRE13962
Molecular_nameCRE13962
CRE13962.1
RP22247
Other_namecr01.sctg22.wum.17
Public_nameCre-sac-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
203 Jul 2008 11:45:36WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE13962
Other_namecr01.sctg22.wum.17
328 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCre-sac-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsac
RNASeq_FPKMWBls:000000419.963From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
20.1623From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
20.3615From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.4544From_analysisRNASeq.remanei.WBls:0000027.control_median
11.0096From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
11.6632From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4.85546From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
9.35688From_analysisRNASeq.remanei.WBls:0000027.control_mean
9.89926From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003812.7652From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
13.4846From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
3.14112From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
9.79697From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:000004122.7461From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
23.0553From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
23.4224From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
24.0532From_analysisRNASeq.remanei.WBls:0000041.control_median
24.5994From_analysisRNASeq.remanei.WBls:0000041.control_mean
24.684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
26.4657From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
27.223From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:000006311.8205From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
13.6115From_analysisRNASeq.remanei.WBls:0000063.control_median
14.1203From_analysisRNASeq.remanei.WBls:0000063.control_mean
15.4025From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
15.9192From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
17.373From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
21.123From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
28.1238From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
4.78489From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
8.57957From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
8.72905From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
9.34772From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
WBls:000010114.4436From_analysisRNASeq.remanei.total_over_all_stages.control_median
15.2286From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00156559
OrthologWBGene00012353Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00038937Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00143984Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00151376Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00119730Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00098080Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00226512Brugia malayiFrom_analysisWormBase-Compara
WBGene00237291Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g10450Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g6309Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12546Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18269Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g8200Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g21256Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g5985Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5406Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1764Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11634Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g13570Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g2364Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g7360Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00152.g5721Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-W09C5.7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20981Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02373.g26212Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03374.g29984Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19323Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06037Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14976Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10013000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2768Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00263526Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00295253Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00085850Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00054782Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00059293Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066603Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00072763Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00073117Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00079802Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Is an ortholog of C. elegans sac-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE13962
Corresponding_transcriptCRE13962.1
Other_sequence (16)
Experimental_infoExpr_patternExpr1092836
Microarray_resultsGPL14146_CRE13962_1788-1847_0.873_43_C
GPL14146_CRE13962_1831-1890_0.905_17_B
GPL14146_CRE13962_1972-2031_0.943_3_A
MethodGene