Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00240711

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00240711SMapS_parentSequenceOVOC_OM2_1
IdentityVersion2
NameCGC_nameOvo-cca-1From_analysisInferred_from_orthology
Sequence_nameOVOC3902
Molecular_nameOVOC3902
OVOC3902.1
OVP00964
Public_nameOvo-cca-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-cca-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcca
RNASeq_FPKMWBls:00001010.718152From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
5.35028From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.045123From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.101315From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
0.105099From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
0.138143From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
0.254587From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
0.267658From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
0.281994From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
0.344132From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
0.387129From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
0.624482From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.811821From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
1.08414From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
1.44445From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
22.1488From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
2.5258From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
9.84813From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:00001075.52001From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010814.5574From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
15.3738From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
23.2909From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
8.2732From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066412.6137From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
14.0888From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
15.5639From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00254642
00254643
00254644
00254645
00254646
00254647
00254648
OrthologWBGene00147845Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00036666Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223190Brugia malayiFrom_analysisWormBase-Compara
WBGene00000367Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00124735Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g2884Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12016Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10859Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17626Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16152Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21361Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4059Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13227Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5741Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8277Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00665.g13282Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03579.g18201Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_19966.g26355Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cca-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18921Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00702.g14574Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00077Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024862Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07533Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15570Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0212210Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051243Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00116989Pristionchus pacificusFrom_analysisWormBase-Compara
chrX_pilon.g19478Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00266270Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286856Trichuris murisFrom_analysisWormBase-Compara
WBGene00295964Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00240556Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241830Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245319Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of C. elegans cca-1. In C. elegans, cca-1 is involved in membrane depolarization; positive regulation of action potential; and regulation of pharyngeal pumping.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC3902
Corresponding_transcriptOVOC3902.1
Other_sequence (33)
MethodGene