WormBase Tree Display for Gene: WBGene00009574

WBGene00009574 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 2
    Name: CGC_name: tmem-184 Person_evidence: WBPerson260
      Sequence_name: F40E10.6
      Molecular_name: F40E10.6
        F40E10.6.1
        CE31508
        F40E10.6.2
        F40E10.6.3
      Other_name: CELE_F40E10.6 Accession_evidence: NDB BX284606
      Public_name: tmem-184
    DB_info: Database: AceView gene XP322
        WormQTL gene WBGene00009574
        WormFlux gene WBGene00009574
        NDB locus_tag CELE_F40E10.6
        Panther gene CAEEL|WormBase=WBGene00009574|UniProtKB=G5EGF1
          family PTHR23423
        NCBI gene 181565
        RefSeq protein NM_001392891.1
        TREEFAM TREEFAM_ID TF314160
        TrEMBL UniProtAcc G5EGF1
        UniProt_GCRP UniProtAcc G5EGF1
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 13 Oct 2023 01:37:05 WBPerson51134 Name_change: CGC_name: tmem-184
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tmem
    Allele (84)
    RNASeq_FPKM (74)
    GO_annotation: 00020057
      00020058
      00020059
    Contained_in_operon: CEOPX003
    Ortholog: WBGene00058541 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029572 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00140838 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00095692 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00125953 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00224222 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g3206 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9300 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7983 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13344 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23184 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24959 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2479 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1232 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6093 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8751 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-F40E10.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10048 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00144.g5536 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01685 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025654 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07054 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g24141 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0142900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20632 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242146 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267452 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288711 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000001759 Saccharomyces cerevisiae From_analysis: Inparanoid
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0035236 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-2925 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050417-219 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070705-124 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-111011-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:1310 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28797 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2445179 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2385897 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306702 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306591 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00015942 Caenorhabditis elegans From_analysis: Panther
      WBGene00012182 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015287 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in several structures, including egg-laying apparatus; nervous system; pharyngeal-intestinal valve; rectal valve cell; and tail hypodermis. Is an ortholog of human TMEM184B (transmembrane protein 184B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F40E10.6
    Corresponding_CDS_history: F40E10.6:wp83
    Corresponding_transcript: F40E10.6.1
      F40E10.6.2
      F40E10.6.3
    Other_sequence (82)
    Associated_feature: WBsf982286
      WBsf1007980
      WBsf1024447
      WBsf238246
  Experimental_info: RNAi_result: WBRNAi00014646 Inferred_automatically: RNAi_primary
      WBRNAi00046842 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr405
      Expr4241
      Expr10835
      Expr1013732
      Expr1034187
      Expr1150712
      Expr2003525
      Expr2021740
    Drives_construct: WBCnstr00011851
      WBCnstr00032092
    Construct_product: WBCnstr00011851
      WBCnstr00032092
    Microarray_results (23)
    Expression_cluster (143)
    Interaction: WBInteraction000352436
      WBInteraction000394983
      WBInteraction000580657
  Map_info: Map: X Position: 20.1119
    Positive: Positive_clone: F40E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027637
    WBPaper00038491
    WBPaper00055090
    WBPaper00065394
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene