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WormBase Tree Display for Gene: WBGene00017686

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Name Class

WBGene00017686SMapS_parentSequenceF21H12
IdentityVersion2
NameCGC_nametpp-2Person_evidenceWBPerson260
Sequence_nameF21H12.6
Molecular_name (3)
Other_nameCELE_F21H12.6Accession_evidenceNDBBX284602
Public_nametpp-2
DB_infoDatabase (14)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
204 Sep 2012 12:07:47WBPerson2970Name_changeCGC_nametpp-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtpp
Allele (70)
RNASeq_FPKM (74)
GO_annotation (12)
OrthologWBGene00025600Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00054005Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00148413Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00124600Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00113345Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
WBGene00223762Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7126Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g974Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11040Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1435Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12488Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g13618Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16460Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9338Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9349Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8624Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00094.g4179Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00639.g13034Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-tpp-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16436Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00318.g9304Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04465Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006174Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11552Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15572Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23290Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g6919Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20124100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4686Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238680Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00264128Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291621Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0020370Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-121214-290Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:12016Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:102724Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:621584Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00000088Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000254Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001172Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00002232Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionF21H12.6 encodes the C. elegans tripeptidyl peptidase II ortholog; loss of F21H12.6 activity via RNAi indicates that the product of F21H12.6 promotes fat formation; an F21H12.6::GFP reporter fusion is expressed in the intestine, the site of fat storage, and in a subset of nerve ring neurons.Paper_evidenceWBPaper00031090
Curator_confirmedWBPerson1843
Date_last_updated15 Oct 2007 00:00:00
Automated_descriptionPredicted to enable tripeptidyl-peptidase activity. Involved in positive regulation of lipid storage. Predicted to be located in cytosol. Expressed in intestine and nerve ring. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Is an ortholog of human TPP2 (tripeptidyl peptidase 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:612Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12016)
Molecular_infoCorresponding_CDSF21H12.6
Corresponding_transcriptF21H12.6.1
Other_sequence (19)
Associated_featureWBsf650111
WBsf665586
WBsf665587
WBsf988054
WBsf988055
WBsf223130
Experimental_infoRNAi_resultWBRNAi00066483Inferred_automaticallyRNAi_primary
WBRNAi00013711Inferred_automaticallyRNAi_primary
WBRNAi00066482Inferred_automaticallyRNAi_primary
WBRNAi00045251Inferred_automaticallyRNAi_primary
Expr_patternExpr4996
Expr1028809
Expr1037591
Expr1149179
Expr2017467
Expr2035606
Drives_constructWBCnstr00012399
WBCnstr00027102
Construct_productWBCnstr00027102
Microarray_results (21)
Expression_cluster (122)
Interaction (38)
Map_infoMapIIPosition-0.510756
PositivePositive_cloneF21H12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031090
WBPaper00038491
WBPaper00049828
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene