WormBase Tree Display for Gene: WBGene00053700

WBGene00053700 SMap: S_parent: Sequence: Crem_Contig1
  Identity: Version: 3
    Name: CGC_name: Cre-stip-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE02065
      Molecular_name: CRE02065
        CRE02065.1
        RP50357
      Other_name: cr01.sctg2.wum.481
      Public_name: Cre-stip-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:44 WBPerson2970 Name_change: CGC_name: Cre-stip-1
        3 03 Jul 2008 11:44:45 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE02065
                Other_name: cr01.sctg2.wum.481
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: stip
    RNASeq_FPKM: WBls:0000004 64.3895 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        66.6583 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        68.9271 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (52)
      WBls:0000027 16.8625 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        18.9425 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        19.9591 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        20.9757 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        23.8573 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        3.67459 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 11.787 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        15.3895 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        16.5117 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        3.4597 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 16.6287 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        16.9987 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        18.2556 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        28.0042 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        28.6641 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        37.7529 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        39.8889 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        42.4597 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 16.1138 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        20.2855 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00148935
    Ortholog: WBGene00007412 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00025732 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00146901 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00117747 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00126551 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00193482 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00230688 Brugia malayi From_analysis: WormBase-Compara
      WBGene00247137 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00117749 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g7728 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g493 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18663 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15732 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8948 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27135 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3134 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6492 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10981 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g14960 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g17702 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g28579 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g29645 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6204 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00277.g8344 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-stip-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7905 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7906 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01053.g17980 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10541 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005203 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08739 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15215 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20193010 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5711 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00257355 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290978 Trichuris muris From_analysis: WormBase-Compara
      WBGene00298268 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00080443 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable nucleic acid binding activity. Is an ortholog of C. elegans stip-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE02065
    Corresponding_CDS_history: CRE02065:rp215
    Corresponding_transcript: CRE02065.1
    Other_sequence (20)
  Experimental_info: Expr_pattern: Expr1111376
    Microarray_results: GPL14146_CRE02065_1997-2056_0.922_9_C
      GPL14146_CRE02065_2143-2202_0.937_4_A
      GPL14146_CRE02065_2434-2493_0.956_1_B
  Method: Gene