WormBase Tree Display for Gene: WBGene00007412
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| WBGene00007412 | SMap | S_parent | Sequence | C07E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | stip-1 | Paper_evidence | WBPaper00029100 | |||||
| Sequence_name | C07E3.1 | ||||||||
| Molecular_name | C07E3.1a | ||||||||
| C07E3.1a.1 | |||||||||
| CE41502 | |||||||||
| C07E3.1b | |||||||||
| CE41503 | |||||||||
| C07E3.1b.1 | |||||||||
| Other_name | CELE_C07E3.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | stip-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Feb 2007 14:39:36 | WBPerson2970 | Name_change | CGC_name | stip-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | stip | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00047647 | ||||||||
| WBStrain00051901 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP2692 | ||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00016383 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable nucleic acid binding activity. Predicted to be involved in spliceosomal complex disassembly. Predicted to be located in nucleus. Predicted to be part of U2-type post-mRNA release spliceosomal complex. Is an ortholog of human TFIP11 (tuftelin interacting protein 11). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C07E3.1a | |||||||
| C07E3.1b | |||||||||
| Corresponding_CDS_history | C07E3.1a:wp180 | ||||||||
| C07E3.1b:wp180 | |||||||||
| Corresponding_transcript | C07E3.1a.1 | ||||||||
| C07E3.1b.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf650497 | ||||||||
| WBsf989320 | |||||||||
| WBsf223783 | |||||||||
| WBsf223784 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr4711 | ||||||||
| Expr1017519 | |||||||||
| Expr1033191 | |||||||||
| Expr1144076 | |||||||||
| Expr2016965 | |||||||||
| Expr2035113 | |||||||||
| Drives_construct | WBCnstr00033758 | ||||||||
| Construct_product | WBCnstr00033758 | ||||||||
| Antibody | WBAntibody00001228 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (44) | |||||||||
| Map_info | Map | II | Position | 2.44704 | Error | 0.010134 | |||
| Positive | Positive_clone | C07E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029100 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062146 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
