WormBase Tree Display for Gene: WBGene00058468

WBGene00058468 SMap: S_parent: Sequence: Crem_Contig15
  Identity: Version: 4
    Name: CGC_name: Cre-acr-8 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07213
      Molecular_name: CRE07213
        CRE07213.1
        RP35523
      Other_name: cr01.sctg11.wum.299
        cr01.sctg11.wum.299.2
      Public_name: Cre-acr-8
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-acr-8
        3 03 Jul 2008 11:45:18 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07213
                Other_name: cr01.sctg11.wum.299
        4 03 Jul 2008 11:48:41 WBPerson4055 Event: Acquires_merge: WBGene00058469
              Name_change: Other_name: cr01.sctg11.wum.299.2
      Acquires_merge: WBGene00058469
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: acr
    RNASeq_FPKM: WBls:0000004 0.836415 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        1.07086 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.3053 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.527255 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        12.2205 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        6.89551 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.3404 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        8.30692 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        9.71834 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.85422 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.58106 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        8.98341 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        9.90555 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.328025 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.565719 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.0331 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        1.04248 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.13212 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        1.22175 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        1.33661 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        1.70401 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 1.52031 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.37387 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00153897
      00153898
      00153899
      00153900
      00153901
      00153902
      00153903
      00153904
    Ortholog: WBGene00000042 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00000043 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00000047 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00002974 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00006765 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00036931 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00122001 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00156787 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00139702 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00128161 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00145120 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00134642 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00122978 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00141395 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00136067 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00092568 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00193924 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00192500 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00227660 Brugia malayi From_analysis: WormBase-Compara
      WBGene00269182 Brugia malayi From_analysis: WormBase-Compara
      WBGene00239539 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g3004 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10338 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3152 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11936 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16021 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25172 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4021 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6025 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g19573 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20287 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00065.g3190 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-acr-8 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13743 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00005.g324 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01328 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023577 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01642 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20963 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0071520 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19900 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00258262 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288522 Trichuris muris From_analysis: WormBase-Compara
      WBGene00289340 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297196 Trichuris muris From_analysis: WormBase-Compara
    Paralog (121)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-8. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE07213
    Corresponding_transcript: CRE07213.1
    Other_sequence (17)
  Experimental_info: Expr_pattern: Expr1092474
    Microarray_results: GPL14146_CRE07213_1209-1268_0.878_33_A
      GPL14146_CRE07213_1386-1445_0.922_8_C
      GPL14146_CRE07213_1551-1610_0.973_1_B
  Method: Gene