WormBase Tree Display for Gene: WBGene00060889

WBGene00060889 SMap: S_parent: Sequence: Crem_Contig34
  Identity: Version: 3
    Name: CGC_name: Cre-unc-54 From_analysis: Inferred_from_orthology
      Sequence_name: CRE20688
      Molecular_name: CRE20688
        CRE20688.1
        RP30192
      Other_name: cr01.sctg20.wum.81
      Public_name: Cre-unc-54
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-unc-54
        3 03 Jul 2008 11:45:34 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE20688
                Other_name: cr01.sctg20.wum.81
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 10.8721 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        11.9646 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        9.77953 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (52)
      WBls:0000027 250.054 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        480.946 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        519.661 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        538.211 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        556.762 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        597.307 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 761.467 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        808.408 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        846.588 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        969.889 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 163.28 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        201.678 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        332.306 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        334.344 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        345.37 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        358.433 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        445.441 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        504.925 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 678.794 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        685.588 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00156242
      00156243
      00156244
      00156245
    Ortholog: WBGene00006789 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00038900 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00147183 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00117763 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00131142 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223568 Brugia malayi From_analysis: WormBase-Compara
      WBGene00224377 Brugia malayi From_analysis: WormBase-Compara
      WBGene00242128 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00246956 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g9085 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6392 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5864 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8240 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4259 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22272 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9281 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14410 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1808 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12497 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_15248.g24974 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g3807 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold572.g4325 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01801.g23223 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_06941.g37197 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09136 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001454 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02608 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g2033 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10010600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2982 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266272 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292203 Trichuris muris From_analysis: WormBase-Compara
    Paralog (28)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans unc-54. In C. elegans, unc-54 is involved in several processes, including egg-laying behavior; muscle contraction; and skeletal muscle myosin thick filament assembly. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (3)
  Experimental_info: Expr_pattern: Expr1112427
    Microarray_results: GPL14146_CRE20688_4666-4725_0.754_247_B
      GPL14146_CRE20688_4802-4861_0.869_23_A
      GPL14146_CRE20688_5773-5832_0.958_1_C
    Expression_cluster: WBPaper00054996:activated_sperm_CRE
  Method: Gene