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WormBase Tree Display for Gene: WBGene00069903

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Name Class

WBGene00069903SMapS_parentSequenceCrem_Contig255
IdentityVersion3
NameCGC_nameCre-nhr-23From_analysisInferred_from_orthology
Sequence_nameCRE07841
Molecular_nameCRE07841
CRE07841.1
RP37621
Other_namecr01.sctg164.wum.9
Public_nameCre-nhr-23
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:28WBPerson1847EventCreated
229 Nov 2007 17:00:42WBPerson2970Name_changeCGC_nameCre-nhr-23
303 Jul 2008 11:46:27WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE07841
Other_namecr01.sctg164.wum.9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:000000443.8983From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
45.5625From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
47.2268From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (51)
WBls:000002711.5939From_analysisRNASeq.remanei.WBls:0000027.control_mean
11.7608From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
12.1902From_analysisRNASeq.remanei.WBls:0000027.control_median
12.6195From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
12.7705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
9.22484From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003816.6587From_analysisRNASeq.remanei.WBls:0000038.control_mean
20.1948From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
21.7787From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
8.00265From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004126.3638From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
28.0275From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
29.2109From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
30.2796From_analysisRNASeq.remanei.WBls:0000041.control_median
30.7835From_analysisRNASeq.remanei.WBls:0000041.control_mean
31.3484From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
33.8385From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
35.9119From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010117.1015From_analysisRNASeq.remanei.total_over_all_stages.control_median
19.9706From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00164155
00164156
00164157
00164158
OrthologWBGene00003622Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00040598Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00142815Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00141710Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00138394Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00147770Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00222157Brugia malayiFrom_analysisWormBase-Compara
WBGene00212067Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237273Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00282358Pristionchus pacificusFrom_analysisWormBase-Compara
CBOVI.g10541Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2440Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1733Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13049Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10737Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g101Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15439Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7874Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g18353Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19199Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00700.g13539Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-nhr-23Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9963Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01445.g20967Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10360Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000213Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_000214Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g9832Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10085800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_10086200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1336Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00261878Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285190Trichuris murisFrom_analysisWormBase-Compara
WBGene00285991Trichuris murisFrom_analysisWormBase-Compara
Paralog (267)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-23. In C. elegans, nhr-23 is involved in several processes, including defense response to Gram-negative bacterium; positive regulation of transcription by RNA polymerase II; and spermatogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE07841
Corresponding_transcriptCRE07841.1
Other_sequence (18)
Experimental_infoExpr_patternExpr1095973
Microarray_resultsGPL14146_CRE07841_397-456_0.734_71_A
GPL14146_CRE07841_501-560_0.846_20_B
GPL14146_CRE07841_565-624_0.857_18_C
MethodGene