WormBase Tree Display for Gene: WBGene00095216

WBGene00095216 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 10
    Name: Sequence_name: PPA05662
      Molecular_name: PPA05662
        PPA05662.1
        PP71222
      Other_name: GENEPREDICTION_SNAP300000062123
        GENEPREDICTION_SNAP300000062124
        GENEPREDICTION_SNAP300000062125
        GENEPREDICTION_SNAP300000062126
        UMM-S328-8.0 Person_evidence: WBPerson606
      Public_name: PPA05662
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 17 Nov 2017 15:19:42 WBPerson4055 Name_change: CGC_name: Ppa-del-9
        3 24 Nov 2017 09:46:49 WBPerson4055 Event: Acquires_merge: WBGene00095217
        4 24 Nov 2017 09:46:49 WBPerson4055 Event: Acquires_merge: WBGene00095218
        5 24 Nov 2017 09:46:49 WBPerson4055 Event: Acquires_merge: WBGene00095219
        6 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        7 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-del-9
        8 27 Nov 2019 12:48:15 WBPerson1983 Name_change: CGC_name: Removed
        9 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Ppa-del-9
        10 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
      Acquires_merge: WBGene00095218
        WBGene00095217
        WBGene00095219
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 16.3796 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 12.2469 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        16.3796 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        20.3611 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00175795
      00175796
      00175797
      00175798
    Ortholog: WBGene00015956 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00015957 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00034807 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00034808 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00051949 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00051950 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00145603 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00130401 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00154923 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00126798 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g2421 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2536 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18749 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g10451 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g420 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1791 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g396 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13075 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20539 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22484 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00033.g1914 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C18B2.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18197 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00003.g176 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00802 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024132 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12892 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20198 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0267600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18782 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans C18B2.5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA05662
    Corresponding_transcript: PPA05662.1
    Other_sequence (22)
  Experimental_info: Microarray_results: GPL14372_Probes_16229
      GPL14372_Probes_65178
      GPL14372_Probes_65179
      GPL14372_Probes_65180
      GPL14372_Probes_65181
      GPL14372_Probes_65182
      GPL14372_Probes_65183
      GPL14372_Probes_70351
  Remark: [190208 pad] The CGC name Ppa-del-9 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [191127 pad] The CGC name Ppa-del-9 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200603 pad] The CGC name Ppa-del-9 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene