WormBase Tree Display for Gene: WBGene00098420

WBGene00098420 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 3
    Name: CGC_name: Ppa-pps-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA08866
      Molecular_name: PPA08866
        PPA08866.1
        PP16765
      Other_name: GENEPREDICTION_SNAP300000065408
        UMM-S212-5.50 Person_evidence: WBPerson606
        Ppa-pps-1
      Public_name: Ppa-pps-1.1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 18 Nov 2010 11:54:47 WBPerson2970 Name_change: CGC_name: Ppa-pps-1
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Ppa-pps-1.1
                Other_name: Ppa-pps-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pps
    RNASeq_FPKM: WBls:0000032 17.8397 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 15.7786 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        17.8397 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        29.496 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00177377
      00177378
      00177379
      00177380
    Ortholog: WBGene00004091 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00026273 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065657 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00162021 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00226055 Brugia malayi From_analysis: WormBase-Compara
      WBGene00180072 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00241585 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g8420 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g41 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11366 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2539 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22097 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20129 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2319 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6783 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22136 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g24152 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g6500 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13091 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-pps-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold585.g4786 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00074.g3444 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_03027.g28817 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16424 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014368 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03082 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g484 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40258400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11528 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00257762 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264578 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291339 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00090246 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00275160 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; adenylylsulfate kinase activity; and sulfate adenylyltransferase (ATP) activity. Predicted to be involved in sulfate assimilation. Is an ortholog of C. elegans pps-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA08866
    Corresponding_transcript: PPA08866.1
    Other_sequence (29)
  Experimental_info: Microarray_results: GPL14372_Probes_43774
      GPL14372_Probes_43775
      GPL14372_Probes_43776
      GPL14372_Probes_43777
      GPL14372_Probes_43778
      GPL14372_Probes_43779
      GPL14372_Probes_43780
      GPL14372_Probes_43781
      GPL14372_Probes_43782
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene