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WormBase Tree Display for Gene: WBGene00099273

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Name Class

WBGene00099273SMapS_parentSequencePPA_ChrV
IdentityVersion1
NameCGC_namePpa-chp-1From_analysisInferred_from_orthology
Sequence_namePPA09719
Molecular_namePPA09719
PPA09719.1
PP29340
Other_nameGENEPREDICTION_SNAP300000066252
UMS-S479-1.20Person_evidenceWBPerson606
Public_namePpa-chp-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchp
RNASeq_FPKMWBls:000003217.1927From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010117.1927From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
24.3464From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
55.8466From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
OrthologWBGene00000502Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00032083Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00069410Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00146313Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00130191Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00163502Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00227543Brugia malayiFrom_analysisWormBase-Compara
WBGene00246762Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g9210Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3065Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g7559Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13120Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10665Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8435Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15368Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g4772Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16398Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17901Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00821.g14376Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-chp-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold542.g3416Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00676.g14304Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_000325Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06898Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20527Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10257500Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g838Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00257579Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285229Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: CHORD; CS domain; HSP20-like chaperone; and CHORD domain. Is an ortholog of C. elegans chp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA09719
Corresponding_transcriptPPA09719.1
Other_sequence (41)
Experimental_infoMicroarray_resultsGPL14372_Probes_36440
GPL14372_Probes_36441
GPL14372_Probes_36442
GPL14372_Probes_36443
GPL14372_Probes_36444
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
MethodGene