WormBase Tree Display for Gene: WBGene00140014

WBGene00140014 SMap: S_parent: Sequence: Cbre_Contig179
  Identity: Version: 2
    Name: CGC_name: Cbn-prpf-4 From_analysis: Inferred_from_orthology
      Sequence_name: CBN01289
      Molecular_name: CBN01289
        CBN01289.1
        CN09167
      Public_name: Cbn-prpf-4
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-prpf-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: prpf
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 16.0471 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        32.0941 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 14.0181 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        15.7728 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        15.8609 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        17.7099 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        18.4492 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 7.32448 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        7.35834 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        7.3922 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 3.9042 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        6.57211 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00203165
      00203166
      00203167
    Ortholog: WBGene00004186 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039451 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072279 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00132150 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g9634 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10611 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15031 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13058 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10730 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g106 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15432 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1750 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g18347 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19207 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00152.g5734 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-prpf-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9949 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00933.g16884 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07579 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000252 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05513 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12568 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10082400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00103392 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00223780 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g1306 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00216770 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00236941 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262574 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287721 Trichuris muris From_analysis: WormBase-Compara
    Paralog (51)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans prpf-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN01289
    Corresponding_transcript: CBN01289.1
    Other_sequence (47)
  Experimental_info: Microarray_results: GPL14142_CBN01289_1165-1224_0.711_214_C
      GPL14142_CBN01289_2047-2106_0.929_9_B
      GPL14142_CBN01289_2189-2248_0.927_11_A
      GPL14142_CBN22094_1460-1519_0.893_22_A
  Method: Gene