WormBase Tree Display for Gene: WBGene00143250

WBGene00143250 SMap: S_parent: Sequence: Cbre_Contig11
  Identity: Version: 1
    Name: CGC_name: Cbn-tfg-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN04525
      Molecular_name: CBN04525
        CBN04525.1
        CN05646
      Other_name: CBN04525
      Public_name: Cbn-tfg-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-tfg-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tfg
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 169.068 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        84.534 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        43.5315 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        50.6824 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        51.7357 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        57.0861 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        64.8735 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 195.495 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        196.298 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        197.102 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 109.506 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        123.905 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00205816
      00205817
      00205818
    Ortholog: WBGene00006565 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00038162 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00056072 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00119477 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP26.g7108 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP29.g21099 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP38.g11015 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g13861 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-tfg-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00734.g14942 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_23699 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001738 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13301 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_10024900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30253300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00013507 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00227221 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g2818 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrI_pilon.g2854 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237104 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable identical protein binding activity. Predicted to be involved in COPII vesicle coating. Is an ortholog of C. elegans tfg-1. In C. elegans, tfg-1 is involved in several processes, including cellular localization; regulation of cell growth; and regulation of cell size. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN04525
    Corresponding_transcript: CBN04525.1
    Other_sequence (36)
  Experimental_info: Microarray_results: GPL14142_CBN04525_944-1003_0.526_172_A
      GPL14142_CBN04525_1127-1186_0.530_168_C
      GPL14142_CBN04525_1147-1206_0.638_90_B
  Method: Gene