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WormBase Tree Display for Gene: WBGene00154960

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Name Class

WBGene00154960SMapS_parentSequenceCbre_Contig12
IdentityVersion2
NameCGC_nameCbn-cya-1From_analysisInferred_from_orthology
Sequence_nameCBN16235
Molecular_nameCBN16235
CBN16235.1
CN24593
Public_nameCbn-cya-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-cya-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcya
RNASeq_FPKMWBls:0000002 (11)
WBls:0000004119.715From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
59.8575From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000241.95749From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.27349From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
4.42573From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
5.6723From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
5.7813From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003810.5344From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
11.6766From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
12.8188From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:000010117.8From_analysisRNASeq.brenneri.total_over_all_stages.control_median
21.8524From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00000863Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00029121Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00055167Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00065754Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00065755Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00066702Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00079098Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00102744Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00119238Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g5801Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7003Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18064Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20129Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3348Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g16109Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6264Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6406Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g9096Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00132.g5212Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-cya-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9754Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01713.g22681Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05680Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_06148Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_06149Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_07489Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009356Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020959Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020961Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03705Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30259700Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00000864Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00017259Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00227740Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g6694Caenorhabditis elegansFrom_analysisWormBase-Compara
chrIII_pilon.g8547Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g3555Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g19572Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g20794Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246337Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00289041Trichuris murisFrom_analysisWormBase-Compara
Paralog (12)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cyclin, C-terminal domain; Cyclin; Cyclin-like superfamily; Cyclin, N-terminal; Cyclin, N-terminal domain; and Cyclin-like. Is an ortholog of C. elegans cya-1. In C. elegans, cya-1 is involved in meiotic cell cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN16235
Corresponding_transcriptCBN16235.1
Other_sequenceCBC00663_1
CBC16443_1
CRC07178_1
Experimental_infoMicroarray_resultsGPL14142_CBN09292_1078-1137_0.849_78_B
GPL14142_CBN09292_1177-1236_0.945_1_A
MethodGene