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WormBase Tree Display for Gene: WBGene00158824

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Name Class

WBGene00158824SMapS_parentSequenceCbre_Contig1100
IdentityVersion2
NameCGC_nameCbn-sup-17.2From_analysisInferred_from_orthology
Sequence_nameCBN20099
Molecular_nameCBN20099
CBN20099.1
CN03666
Public_nameCbn-sup-17.2
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-sup-17.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsup
RNASeq_FPKMWBls:0000002 (11)
WBls:000000418.9303From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
37.8607From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.4579From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
11.9447From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
7.16953From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
9.65183From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
9.73238From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000387.92672From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
8.34933From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
8.77193From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:00001013.03076From_analysisRNASeq.brenneri.total_over_all_stages.control_median
7.98803From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00218421
OrthologWBGene00006324Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00033327Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00060001Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00112423Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00130009Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g9188Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4880Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10138Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1590Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17578Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7735Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5531Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21176Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1410Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17720Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g19404Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24243Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00186.g6518Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-sup-17Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20539Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01411.g20755Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05079Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002527Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06191Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15811Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10124010Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00223337Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g1674Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237507Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259523Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293620Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00151753Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00155271Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158339Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161017Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00162861Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163952Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164245Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metallopeptidase activity. Is an ortholog of C. elegans sup-17. In C. elegans, sup-17 is involved in several processes, including nematode male tail tip morphogenesis; positive regulation of transforming growth factor beta receptor signaling pathway; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN20099
Corresponding_transcriptCBN20099.1
Other_sequence (17)
Experimental_infoMicroarray_resultsGPL14142_CBN13028_2046-2105_0.817_97_B
GPL14142_CBN13028_2120-2179_0.912_10_C
GPL14142_CBN13028_2343-2402_0.813_103_A
MethodGene