WormBase Tree Display for Gene: WBGene00162294

WBGene00162294 SMap: S_parent: Sequence: Cbre_Contig3
  Identity: Version: 2
    Name: CGC_name: Cbn-mmcm-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN23569
      Molecular_name: CBN23569
        CBN23569.1
        CN29448
      Public_name: Cbn-mmcm-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-mmcm-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mmcm
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 119.249 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        19.2854 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        219.212 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        26.7733 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        28.2692 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        47.2333 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        48.8968 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        51.6904 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 56.4334 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        58.4506 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        60.4678 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (18)
      WBls:0000101 44.3551 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        77.0291 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00221286
      00221287
      00221288
      00221289
      00221290
      00221291
    Ortholog: WBGene00014202 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00026437 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00061571 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127752 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g4576 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3084 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20783 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6605 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1398 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5486 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11716 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4925 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8673 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16852 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00013.g956 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_27409.g27530 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mmcm-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold54.g334 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15098 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03782.g31237 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10188 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008817 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11622 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g6980 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30005900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00104630 Pristionchus pacificus From_analysis: WormBase-Compara
      chrIII_pilon.g7337 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00208211 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00275806 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258841 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00262235 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290754 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00154910 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable cobalamin binding activity; metal ion binding activity; and methylmalonyl-CoA mutase activity. Is an ortholog of C. elegans mmcm-1. In C. elegans, mmcm-1 is involved in amino acid metabolic process and fatty acid metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN23569
    Corresponding_CDS_history: CBN23569:np197
    Corresponding_transcript: CBN23569.1
    Other_sequence (134)
  Experimental_info: Microarray_results: GPL14142_CBN23569_994-1053_0.861_23_C
      GPL14142_CBN23569_1159-1218_0.694_138_B
      GPL14142_CBN23569_1293-1352_0.678_147_A
  Method: Gene