WormBase Tree Display for Gene: WBGene00162297

WBGene00162297 SMap: S_parent: Sequence: Cbre_Contig18
  Identity: Version: 1
    Name: CGC_name: Cbn-xnp-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN23572
      Molecular_name: CBN23572
        CBN23572.1
        CN11203
      Other_name: CBN23572
      Public_name: Cbn-xnp-1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-xnp-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: xnp
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 109.834 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        54.917 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 19.8655 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        20.3076 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        22.1263 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        22.4243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        26.3163 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 23.452 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        26.2288 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        29.0055 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 11.0205 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        16.2046 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00221294
      00221295
    Ortholog: WBGene00006961 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00040891 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060430 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098088 Pristionchus pacificus From_analysis: OMA
      WBGene00133607 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g9339 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7544 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17979 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g20707 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14793 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6659 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g501 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2983 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8082 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g17235 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21109 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00471.g11232 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-xnp-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8508 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00461.g11672 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14742 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11779 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13719 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g14182 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g9302 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10308200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00221963 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g753 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00236833 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258413 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290671 Trichuris muris From_analysis: WormBase-Compara
      WBGene00294471 Trichuris muris From_analysis: WormBase-Compara
    Paralog (29)
    Structured_description: Automated_description: Predicted to enable ATP binding activity and ATP-dependent chromatin remodeler activity. Is an ortholog of C. elegans xnp-1. In C. elegans, xnp-1 is involved in several processes, including embryo development; gonad development; and vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN23572
    Corresponding_transcript: CBN23572.1
    Other_sequence (33)
  Experimental_info: Microarray_results: GPL14142_CBN14671_118-177_0.758_107_A
      GPL14142_CBN14671_365-424_0.910_13_B
  Method: Gene