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WormBase Tree Display for Gene: WBGene00060430

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Name Class

WBGene00060430SMapS_parentSequenceCrem_Contig11
IdentityVersion3
NameCGC_nameCre-xnp-1From_analysisInferred_from_orthology
Sequence_nameCRE03874
Molecular_nameCRE03874
CRE03874.1
RP43898
Other_namecr01.sctg18.wum.73
Public_nameCre-xnp-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:27WBPerson1847EventCreated
229 Nov 2007 17:00:40WBPerson2970Name_changeCGC_nameCre-xnp-1
303 Jul 2008 11:45:32WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE03874
Other_namecr01.sctg18.wum.73
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classxnp
RNASeq_FPKMWBls:000000492.9511From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
94.4704From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
95.9897From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002722.1521From_analysisRNASeq.remanei.WBls:0000027.control_mean
23.9278From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
26.9928From_analysisRNASeq.remanei.WBls:0000027.control_median
30.0579From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
30.6729From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
3.9496From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003821.8133From_analysisRNASeq.remanei.WBls:0000038.control_mean
29.3695From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
29.8238From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
6.2465From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
WBls:000004117.7769From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
18.7182From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
19.8678From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
32.3985From_analysisRNASeq.remanei.WBls:0000041.control_mean
32.5164From_analysisRNASeq.remanei.WBls:0000041.control_median
45.1651From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
46.1862From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
46.6768From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010117.8871From_analysisRNASeq.remanei.total_over_all_stages.control_median
26.6308From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00155850
00155851
Ortholog (33)
Paralog (34)
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP-dependent chromatin remodeler activity. Is an ortholog of C. elegans xnp-1. In C. elegans, xnp-1 is involved in several processes, including embryo development; gonad development; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE03874
Corresponding_transcriptCRE03874.1
Other_sequence (39)
Experimental_infoExpr_patternExpr1092243
Microarray_resultsGPL14146_CRE03874_3066-3125_0.855_63_C
GPL14146_CRE03874_3111-3170_0.883_42_A
GPL14146_CRE03874_3343-3402_0.908_16_B
MethodGene