WormBase Tree Display for Gene: WBGene00175640

WBGene00175640 SMap: S_parent: Sequence: Cjap.Contig12668
  Identity: Version: 3
    Name: CGC_name: Cjp-icln-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA20069
      Molecular_name: CJA20069a
        CJA20069a.1
        JA47494
        CJA20069b
        JA57815
        CJA20069b.1
      Public_name: Cjp-icln-1.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 22 Jan 2009 15:16:35 WBPerson4055 Event: Imported: from WASHU
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cjp-icln-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: icln
    RNASeq_FPKM: WBls:0000004 52.9514 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 52.4089 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 40.5707 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        48.1807 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        55.7907 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 164.793 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        172.617 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        177.632 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        18.3937 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        20.4986 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        24.8008 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        29.2388 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        56.1047 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        82.9706 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        86.3681 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 52.4089 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        68.6666 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00223658
      00223659
      00223660
      00223661
      00223662
      00223663
      00223664
    Ortholog: WBGene00002046 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00040460 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00057839 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00063896 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00073657 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00271728 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00222142 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8151 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13971 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19241 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4044 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26698 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12357 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16391 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3359 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12748 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00155.g5764 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-icln-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20274 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00790.g15499 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16546 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013341 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01354 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13016 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40352100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11233 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239011 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263610 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00132332 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in cell volume homeostasis; chloride transport; and spliceosomal snRNP assembly. Predicted to be located in cytosol and plasma membrane. Predicted to be part of methylosome and pICln-Sm protein complex. Is an ortholog of C. elegans icln-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA20069a
      CJA20069b
    Corresponding_transcript: CJA20069a.1
      CJA20069b.1
    Other_sequence: PPC08379_1
      CBC05644_1
  Experimental_info: Expr_pattern: Expr1086550
    Microarray_results: GPL14145_CJA13128_307-366_0.961_1_A
  Method: Gene