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WormBase Tree Display for Gene: WBGene00040460

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Name Class

WBGene00040460SMapS_parentSequencecb25.fpc4260b
IdentityVersion3
NameCGC_nameCbr-icln-1From_analysisInferred_from_orthology
Sequence_nameCBG21766
Molecular_nameCBG21766a
CBG21766a.1
CBP27692
CBG21766b
CBP24226
CBG21766b.1
Other_nameCbr-icl-1From_analysisInferred_from_orthology
CBG_21766Accession_evidenceNDBHE600966
Public_nameCbr-icln-1
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:10WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-icl-1
316 Nov 2010 16:33:39WBPerson2970Name_changeCGC_nameCbr-icln-1
Other_nameCbr-icl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classicln
RNASeq_FPKMWBls:000000252.9695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
59.3987From_analysisRNASeq.briggsae.WBls:0000002.control_mean
61.9127From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
63.314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
61.147From_analysisRNASeq.briggsae.WBls:0000002.control_mean
62.6133From_analysisRNASeq.briggsae.WBls:0000002.control_median
66.3919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000375.0493From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
79.1528From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
83.2564From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
75.8725From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
78.0594From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000457.0501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
58.3802From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
59.7103From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
61.8561From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
63.4761From_analysisRNASeq.briggsae.WBls:0000004.control_mean
68.9233From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
69.8406From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.2725From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
20.9046From_analysisRNASeq.briggsae.WBls:0000027.control_mean
3.31734From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
47.124From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
27.6379From_analysisRNASeq.briggsae.WBls:0000027.control_mean
29.6982From_analysisRNASeq.briggsae.WBls:0000027.control_median
47.8378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003538.8476From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003814.7349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
37.499From_analysisRNASeq.briggsae.WBls:0000038.control_mean
37.7436From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
38.4702From_analysisRNASeq.briggsae.WBls:0000038.control_median
39.1969From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
58.3204From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:000004132.8338From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
75.3272From_analysisRNASeq.briggsae.WBls:0000041.control_mean
84.3419From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
86.7508From_analysisRNASeq.briggsae.WBls:0000041.control_median
89.1598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
94.9733From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
36.0656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
49.375From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
64.4582From_analysisRNASeq.briggsae.WBls:0000041.control_mean
66.8585From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:0000063109.453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
54.6512From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
58.5551From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
65.4151From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
72.3838From_analysisRNASeq.briggsae.WBls:0000063.control_mean
73.8444From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
59.5826From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
62.4989From_analysisRNASeq.briggsae.WBls:0000063.control_median
70.2502From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010156.3529From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
58.5551From_analysisRNASeq.briggsae.total_over_all_stages.control_median
57.1047From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
59.6465From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00143879
00143880
00143881
00143882
00143883
00143884
00143885
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to be involved in cell volume homeostasis; chloride transport; and spliceosomal snRNP assembly. Predicted to be located in cytosol and plasma membrane. Predicted to be part of methylosome and pICln-Sm protein complex. Is an ortholog of C. elegans icln-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG21766a
CBG21766b
Corresponding_CDS_historyCBG21766:bp194
Corresponding_transcriptCBG21766a.1
CBG21766b.1
Other_sequenceCR01545
CJC15635_1
CRC07902_1
CBC05644_1
Experimental_infoExpr_patternExpr1052028
Microarray_resultsGPL8303_CB6_WBGene00040460_A
GPL8303_CB6_WBGene00040460_B
GPL14143_CBG21766_127-186_0.733_46_A
MethodGene