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WormBase Tree Display for Gene: WBGene00225751

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Name Class

WBGene00225751SMapS_parentSequenceBm_v4_Chr3_scaffold_001
IdentityVersion4
NameCGC_nameBma-serr-1From_analysisInferred_from_orthology
Sequence_nameBm5490
Molecular_nameBm5490
Bm5490.1
BM41765
Other_nameTAG5490Curator_confirmedWBPerson4055
Bm1_24445ACurator_confirmedWBPerson4055
Bm1_24445Person_evidenceWBPerson5841
Public_nameBma-serr-1
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
204 Jun 2020 14:38:21WBPerson1983Name_changeCGC_nameBma-serr-1
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-serr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classserr
RNASeq_FPKM (11)
OrthologWBGene00143884Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153513Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162480Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00033458Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034453Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CBOVI.g12079Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g12408Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1689Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2260Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g7707Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g7708Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13135Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4448Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24343Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00682.g13401Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g2323Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g12244Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold479.g1814Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20444Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01259.g19642Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07049Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_07201Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_012687Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_012690Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g06887Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16592Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10315000Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00011353Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00064238Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00069444Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00072952Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00102126Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00164984Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrI_pilon.g1615Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237057Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261718Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290656Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00224592Brugia malayiFrom_analysisWormBase-Compara
WBGene00226264Brugia malayiFrom_analysisWormBase-Compara
WBGene00269175Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Tryptophan synthase beta subunit-like PLP-dependent enzyme and Pyridoxal-phosphate dependent enzyme. Is an ortholog of C. elegans serr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5490
Corresponding_transcriptBm5490.1
Other_sequence (25)
Experimental_infoExpression_clusterWBPaper00051007:downregulated_F120_vs_F30
WBPaper00061765:Adult_vs_Micro_Upregulated
WBPaper00061765:L4_vs_Micro_Upregulated
ReferenceWBPaper00045439
Remark[210528 pad] The CGC name Bma-serr-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene