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WormBase Tree Display for Gene: WBGene00227885

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Name Class

WBGene00227885SMapS_parentSequenceBm_v4_Chr1_scaffold_001
Identity (5)
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000009779.8241From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
48.2366From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
53.649From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
57.373From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
63.8522From_analysisRNASeq.brugia.WBls:0000097.control_median
65.4816From_analysisRNASeq.brugia.WBls:0000097.control_mean
70.3315From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
75.7358From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
87.5637From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
WBls:000007821.1715From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
23.222From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
48.2952From_analysisRNASeq.brugia.WBls:0000078.control_mean
50.0778From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
52.4985From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
61.1034From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
64.944From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
65.0495From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
WBls:000008065.3966From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
73.0138From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
73.6458From_analysisRNASeq.brugia.WBls:0000080.control_mean
74.8579From_analysisRNASeq.brugia.WBls:0000080.control_median
76.702From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
79.4709From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:000008264.6356From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
71.0077From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
72.0681From_analysisRNASeq.brugia.WBls:0000082.control_mean
74.1092From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
74.7303From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
75.8576From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (82)
WBls:0000092114.309From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
114.709From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
115.108From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:0000094109.697From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
113.868From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
118.038From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010166.4802From_analysisRNASeq.brugia.total_over_all_stages.control_median
66.6963From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:0000662161.745From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
169.022From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
176.299From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:000066375.1029From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00246773
Ortholog (39)
Structured_descriptionAutomated_descriptionPredicted to enable MAP-kinase scaffold activity. Is an ortholog of C. elegans unc-16. In C. elegans, unc-16 is involved in several processes, including defecation; egg-laying behavior; and regulation of JNK cascade.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm7624a
Bm7624b
Bm7624c
Bm7624d
Corresponding_transcriptBm7624a.1
Bm7624b.1
Bm7624c.1
Bm7624d.1
Other_sequenceJI221716.1
ACC06795_1
JO472375.1
SRC09322_1
Tcir_isotig28611
JI165046.1
FK809211.1
FE911952.1
Dviv_isotig09852
CRC04177_1
JI164967.1
JI479761.1
JI466840.1
FC552533.1
HG00390
ES272948.1
JI482653.1
TM02073
TSC12465_1
CR08132
SRC04651_1
JI170505.1
JO470038.1
JI476939.1
BM00412
Acan_isotig07781
ACC21273_1
BMC16536_1
Dviv_isotig09853
MIC02311_1
JI461688.1
BE191646.1
TMC01839_1
RSC01640_1
BMC08646_1
CRC02473_1
Hbac_isotig02332
FC821946.1
JI474292.1
Oden_isotig18789
JI481874.1
Oden_isotig19058
FC542608.1
NAC01936_1
CR08371
RS07074
Dviv_isotig22163
BMC13064_1
ES563301.1
JI470548.1
FC552215.1
Dviv_isotig09854
FG586459.1
SRC05276_1
FC552042.1
TSC09856_1
ASC01858_1
BU087843.1
AS00685
OVC02991_1
SR03943
FE911058.1
FC813227.1
BMC07339_1
SS01454
CJC00626_1
JI166846.1
OVC03630_1
AW355767.1
SSC00015_1
FK802446.1
JI472155.1
MI02804
FC821330.1
HGC11317_1
JI462519.1
JI177924.1
FC819043.1
AW519333.1
JI483019.1
FC552232.1
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P13
WBPaper00051007:downregulated_M30_vs_L4
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00051007:upregulated_F30_vs_L4
WBPaper00051007:upregulated_M120_vs_M30
WBPaper00051007:upregulated_M120_vs_M42
ReferenceWBPaper00045439
Remark[190208 pad] The CGC name Bma-unc-16 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Bma-unc-16 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene