WormBase Tree Display for Gene: WBGene00007703
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WBGene00007703 | SMap | S_parent | Sequence | CHROMOSOME_III | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | gbf-1 | Person_evidence | WBPerson508 | |||
Sequence_name | C24H11.7 | ||||||
Molecular_name | C24H11.7a | ||||||
C24H11.7a.1 | |||||||
CE44078 | |||||||
C24H11.7b | |||||||
CE47290 | |||||||
C24H11.7b.1 | |||||||
Other_name | phi-34 | Person_evidence | WBPerson2582 | ||||
CELE_C24H11.7 | Accession_evidence | NDB | BX284603 | ||||
Public_name | gbf-1 | ||||||
DB_info | Database | AceView | gene | 3M842 | |||
WormQTL | gene | WBGene00007703 | |||||
WormFlux | gene | WBGene00007703 | |||||
NDB | locus_tag | CELE_C24H11.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00007703|UniProtKB=G5EGS5 | |||||
family | PTHR10663 | ||||||
NCBI | gene | 176609 | |||||
RefSeq | protein | NM_001379939.1 | |||||
NM_001379938.2 | |||||||
SwissProt | UniProtAcc | G5EGS5 | |||||
UniProt_GCRP | UniProtAcc | G5EGS5 | |||||
OMIM | gene | 603698 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gbf | ||||||
Allele (623) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (17) | |||||||
Ortholog (48) | |||||||
Paralog | WBGene00001743 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00008685 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00012386 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00013223 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00019726 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity. Involved in endosomal transport; organelle organization; and secretion. Located in Golgi cis cisterna and endoplasmic reticulum exit site. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease dominant intermediate A. Is an ortholog of human GBF1 (golgi brefeldin A resistant guanine nucleotide exchange factor 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0110202 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4181) | ||
Molecular_info | Corresponding_CDS | C24H11.7a | |||||
C24H11.7b | |||||||
Corresponding_CDS_history | C24H11.7:wp183 | ||||||
C24H11.7:wp206 | |||||||
Corresponding_transcript | C24H11.7a.1 | ||||||
C24H11.7b.1 | |||||||
Other_sequence | SRC08009_1 | ||||||
FE925987.1 | |||||||
PVC01494_1 | |||||||
MIC06030_1 | |||||||
FE930295.1 | |||||||
FE925329.1 | |||||||
HGC05218_1 | |||||||
FE931288.1 | |||||||
EH362900.1 | |||||||
FE929652.1 | |||||||
FG586643.1 | |||||||
FE931388.1 | |||||||
CR07797 | |||||||
FC810402.1 | |||||||
HG09440 | |||||||
JI164034.1 | |||||||
EH362862.1 | |||||||
FG350891.1 | |||||||
Dviv_isotig23558 | |||||||
MI01875 | |||||||
DN190549.1 | |||||||
FE927287.1 | |||||||
FE928059.1 | |||||||
FE927082.1 | |||||||
FE927829.1 | |||||||
BMC05308_1 | |||||||
FE927311.1 | |||||||
GP00896 | |||||||
FE926787.1 | |||||||
FE926828.1 | |||||||
MA00614 | |||||||
HGC11989_1 | |||||||
HG05061 | |||||||
FG351425.1 | |||||||
Tcol_isotig09248 | |||||||
Dviv_isotig33841 | |||||||
Hbac_isotig06595 | |||||||
FE930796.1 | |||||||
FG354239.1 | |||||||
CRC04205_1 | |||||||
FE928374.1 | |||||||
MAC00019_1 | |||||||
FE929139.1 | |||||||
Tcol_isotig09249 | |||||||
FE931449.1 | |||||||
Acan_isotig19386 | |||||||
Acan_isotig16065 | |||||||
FE926315.1 | |||||||
FE929361.1 | |||||||
Dviv_isotig33481 | |||||||
CV200798.1 | |||||||
FG349938.1 | |||||||
FE928835.1 | |||||||
Associated_feature | WBsf667453 | ||||||
WBsf667454 | |||||||
WBsf667455 | |||||||
WBsf994483 | |||||||
WBsf994484 | |||||||
WBsf994485 | |||||||
WBsf994486 | |||||||
WBsf1016076 | |||||||
WBsf227598 | |||||||
Experimental_info | RNAi_result (22) | ||||||
Expr_pattern | Expr1029033 | ||||||
Expr1033332 | |||||||
Expr1145155 | |||||||
Expr2011957 | |||||||
Expr2030194 | |||||||
Antibody | WBAntibody00002462 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (79) | |||||||
Interaction (74) | |||||||
Map_info | Map | III | Position | 12.2356 | Error | 0.075847 | |
Positive | Positive_clone | C24H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00036769 | ||||||
WBPaper00038491 | |||||||
WBPaper00042578 | |||||||
WBPaper00045696 | |||||||
WBPaper00047001 | |||||||
WBPaper00050112 | |||||||
WBPaper00055090 | |||||||
WBPaper00064389 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |