WormBase Tree Display for Gene: WBGene00019726
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| WBGene00019726 | SMap | S_parent | Sequence | M02B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bris-1 | Person_evidence | WBPerson194 | |||||
| Sequence_name | M02B7.5 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_M02B7.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | bris-1 | ||||||||
| DB_info | Database | AceView | gene | 4E572 | |||||
| WormQTL | gene | WBGene00019726 | |||||||
| WormFlux | gene | WBGene00019726 | |||||||
| NDB | locus_tag | CELE_M02B7.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019726|UniProtKB=Q94287 | |||||||
| family | PTHR10663 | ||||||||
| NCBI | gene | 177142 | |||||||
| RefSeq | protein | NM_001380167.2 | |||||||
| NM_001380166.1 | |||||||||
| NM_068019.6 | |||||||||
| NM_001307359.4 | |||||||||
| TrEMBL | UniProtAcc | U4PAR9 | |||||||
| U4PB66 | |||||||||
| Q94287 | |||||||||
| U4PLL0 | |||||||||
| UniProt_GCRP | UniProtAcc | Q94287 | |||||||
| OMIM | gene | 300522 | |||||||
| 610166 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 May 2014 11:44:19 | WBPerson2970 | Name_change | CGC_name | bris-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bris | ||||||||
| Allele (169) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00124506 | ||||||||
| 00124507 | |||||||||
| Contained_in_operon | CEOP4659 | ||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00012386 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00013223 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001743 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007703 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008685 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of ARF protein signal transduction. Human ortholog(s) of this gene implicated in intellectual developmental disorder with short stature and behavioral abnormalities; lung adenocarcinoma; and non-syndromic X-linked intellectual disability 1. Is an ortholog of human IQSEC1 (IQ motif and Sec7 domain ArfGEF 1); IQSEC2 (IQ motif and Sec7 domain ArfGEF 2); and IQSEC3 (IQ motif and Sec7 domain ArfGEF 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29112) | ||||
| DOID:0112038 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29059) | ||||||
| DOID:3910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29112) | ||||||
| DOID:0111674 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29112) | ||||||
| Molecular_info | Corresponding_CDS | M02B7.5a | |||||||
| M02B7.5b | |||||||||
| M02B7.5c | |||||||||
| M02B7.5d | |||||||||
| Corresponding_CDS_history | M02B7.5:wp105 | ||||||||
| M02B7.5:wp152 | |||||||||
| Corresponding_transcript | M02B7.5a.1 | ||||||||
| M02B7.5b.1 | |||||||||
| M02B7.5c.1 | |||||||||
| M02B7.5d.1 | |||||||||
| Other_sequence (38) | |||||||||
| Associated_feature (23) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00065627 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00111982 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111978 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034378 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050812 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111980 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017121 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1024 | ||||||||
| Expr6408 | |||||||||
| Expr14412 | |||||||||
| Expr1014185 | |||||||||
| Expr1038528 | |||||||||
| Expr1154503 | |||||||||
| Expr2009657 | |||||||||
| Expr2027896 | |||||||||
| Drives_construct | WBCnstr00002620 | ||||||||
| WBCnstr00025646 | |||||||||
| Construct_product | WBCnstr00025646 | ||||||||
| WBCnstr00040843 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Map | IV | Position | -2.15618 | |||||
| Positive | Positive_clone | M02B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042723 | |||||||||
| WBPaper00045516 | |||||||||
| WBPaper00053879 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
