WormBase Tree Display for Gene: WBGene00085828

WBGene00085828 SMap: S_parent: Sequence: Crem_Contig82
  Identity: Version: 2
    Name: CGC_name: Cre-tspo-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE09648
      Molecular_name: CRE09648
        CRE09648.1
        RP39039
      Public_name: Cre-tspo-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 03 Jul 2008 11:46:54 WBPerson4055 Event: Created
        2 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cre-tspo-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tspo
    RNASeq_FPKM: WBls:0000004 199.679 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        211.305 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        222.931 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 56.685 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        66.1526 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        72.0929 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        74.2113 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        82.2699 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        83.2643 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 145.528 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        163.179 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        201.518 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        71.8861 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 113.223 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        124.169 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        125.203 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        150.029 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        154.162 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        174.854 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        176.795 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        210.728 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 (12)
      WBls:0000101 126.322 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        130.231 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00172362
    Ortholog (28)
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans tspo-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE09648
    Corresponding_transcript: CRE09648.1
    Other_sequence: GO240382.1
      OOC00960_1
      MIC07020_1
      AYC03881_1
      BU087386.1
      GP01801
      BMC02787_1
      NAC00446_1
      EX009666.1
      Tcir_isotig07151
      WBC01768_1
      EX013637.1
      MCC02117_1
      PPC05789_1
      HGC01119_2
      ASC21773_1
      HBC18371_1
      ES411535.1
      HCC02347_1
      FE910371.1
      MJ00671
      JI172709.1
      MHC02788_1
      HG03462
      PPC17428_1
      TDC00381_1
      JO467737.1
      Oden_isotig18030
      GW412368.1
      ACC00698_1
      FE919849.1
      BXC03464_1
      SSC01796_1
      HC07790
      AE00169
      HG00093
      AE02216
      Acan_isotig11177
      CBC03671_1
      NBC09728_1
      PSC01577_1
      Dviv_isotig03931
      CR12373
      MC00873
      CK850309.1
      GW408498.1
      EX013979.1
      AS02245
      HGC01119_1
      OF00202
      MJC00003_1
      GW406519.1
      CR04149
      MI02537
      GW408846.1
      DIC00653_1
      Name_isotig06946
      HGC11014_1
      MH02344
      EX012451.1
      Dviv_isotig03928
      PPC05344_1
      GW412155.1
      NB09722
      BG467691.1
      HGC08964_1
      DI01103
      HG02003
      BUC02039_1
      SS01421
      Tcol_isotig12652
      CJC09035_1
      CB043007.1
      ES739528.1
      Hbac_isotig03495
      HC03977
      HBC04531_1
      EX013248.1
      BU666848.1
      GPC00055_1
      BU088610.1
      EX008815.1
      Name_isotig02677
      CRC06944_1
      GE639040.1
  Experimental_info: Expr_pattern: Expr1112530
    Microarray_results: GPL14146_CRE09648_491-550_0.792_38_A
  Method: Gene