WormBase Tree Display for Gene: WBGene00108227

WBGene00108227 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 2
    Name: CGC_name: Ppa-asns-2.1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA18673
      Molecular_name: PPA18673
        PPA18673.1
        PP16927
      Other_name: GENEPREDICTION_SNAP300000075487
        UMM-S293-0.0 Person_evidence: WBPerson606
      Public_name: Ppa-asns-2.1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-asns-2.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: asns
    RNASeq_FPKM: WBls:0000032 6.54489 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 13.3468 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        33.4954 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        6.54489 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    GO_annotation: 00181692
      00181693
    Ortholog (26)
    Paralog: WBGene00112483 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00103765 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277045 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable asparagine synthase (glutamine-hydrolyzing) activity. Predicted to be involved in asparagine biosynthetic process. Is an ortholog of C. elegans asns-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA18673
    Corresponding_transcript: PPA18673.1
    Other_sequence: EY471705.1
      GO254897.1
      EY465426.1
      GO252401.1
      Dviv_isotig11661
      ACC03519_1
      ASC24501_1
      FC543312.1
      ACC00156_1
      FK807364.1
      CBC02406_2
      FC555722.1
      Hbac_isotig01083
      Dviv_isotig11662
      EX828027.1
      BUC00103_1
      FF678748.1
      CBC16034_1
      FC553947.1
      CJC08632_1
      FK801484.1
      BXC03048_1
      CRC00594_1
      MIC04386_1
      FF679143.1
      FK806764.1
      FK808410.1
      GO254860.1
      GP02878
      HBC20370_1
      JI213793.1
      FF678456.1
      FC546298.1
      AE00834
      GO254790.1
      JO470473.1
      GO254914.1
      FF678901.1
      FC539254.1
      FK804786.1
      EY472775.1
      EB763527.1
      ACC24616_1
      NBC07994_1
      Dviv_isotig11664
      FC544016.1
      FC549575.1
      Oden_isotig19423
      ACC26399_1
      GO254948.1
      FK801963.1
      FK801157.1
      FK805169.1
      BG438316.1
      FK801310.1
      EW744357.1
      HC04169
      FK800123.1
      FK802968.1
      CR02768
      FC542020.1
      AS08320
      EY467911.1
      FK809456.1
      HBC12594_1
      FK805223.1
      JI235920.1
      ACC05929_1
      FK806265.1
      FK808903.1
      Tcol_isotig15014
      HBC17133_1
      GPC01421_1
      FK806981.1
      ASC34072_1
      Dviv_isotig11663
      FK808210.1
      FK809251.1
      ASC38599_1
      EW743132.1
      HCC02595_1
      EB763539.1
      JI172356.1
      FK804050.1
      EY473114.1
      Tcol_isotig20664
      Acan_isotig07952
      NB12476
  Experimental_info: Microarray_results: GPL14372_Probes_75307
      GPL14372_Probes_75309
      GPL14372_Probes_75310
      GPL14372_Probes_75311
      GPL14372_Probes_75312
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_S.aureus_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene