WormBase Tree Display for Gene: WBGene00273976

WBGene00273976 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 6
    Name: CGC_name: Ppa-ssup-72 From_analysis: Inferred_from_orthology
      Sequence_name: PPA35607
      Molecular_name: PPA35607
        PPA35607.1
        PP64723
      Public_name: Ppa-ssup-72
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-ssup-72
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Ppa-ssup-72
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-ssup-72
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ssup
    RNASeq_FPKM: WBls:0000032 52.1622 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 176.075 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        52.1622 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        76.0791 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00281507
      00281508
      00281509
    Ortholog (31)
    Structured_description: Automated_description: Predicted to enable phosphoprotein phosphatase activity. Predicted to be involved in mRNA processing. Predicted to be located in nucleus. Is an ortholog of C. elegans ssup-72. In C. elegans, ssup-72 is involved in regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA35607
    Corresponding_transcript: PPA35607.1
    Other_sequence: EX007252.1
      ACC15666_1
      NAC00304_1
      JI182315.1
      Tcir_isotig19115
      BG467490.1
      Dviv_isotig02299
      HG06771
      Name_isotig02423
      Oden_isotig18185
      EY471601.1
      Acan_isotig05159
      Tcir_isotig18660
      Tcir_isotig21496
      EX564932.1
      ACC34062_1
      EX916661.1
      Acan_isotig07185
      MCC01356_1
      Name_isotig09503
      JI469393.1
      HG06479
      JI179405.1
      JI179177.1
      ES412267.1
      EY458169.1
      MA00692
      HG07555
      Hbac_isotig04308
      PP00108
      TVC01095_1
      Acan_isotig05160
      MC02682
      Dviv_isotig33129
      HGC02764_1
      EX014476.1
      TV01305
      PPC00181_1
      Tcir_isotig17307
      HBC11924_1
      MAC00386_1
  Experimental_info: Microarray_results: GPL14372_Probes_64251
      GPL14372_Probes_64252
      GPL14372_Probes_64253
      GPL14372_Probes_64254
      GPL14372_Probes_64255
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Remark: [190208 pad] The CGC name Ppa-ssup-72 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-ssup-72 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene