WormBase Tree Display for Gene: WBGene00278357

WBGene00278357 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 6
    Name: CGC_name: Ppa-idha-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA39988
      Molecular_name: PPA39988
        PPA39988.1
        PP66027
      Public_name: Ppa-idha-1
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:22 WBPerson4055 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-idha-1
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-idha-1
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-idha-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: idha
    RNASeq_FPKM: WBls:0000032 138.803 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 101.641 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        80.148 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00284349
    Ortholog (33)
    Paralog: WBGene00098570 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111219 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113924 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in tricarboxylic acid cycle. Is an ortholog of C. elegans idha-1. In C. elegans, idha-1 is involved in protein folding. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA39988
    Corresponding_transcript: PPA39988.1
    Other_sequence: HG02217
      GW409011.1
      FC547641.1
      HG07930
      PPC09057_1
      EY472053.1
      Tcir_isotig26617
      EX008841.1
      TSC04486_1
      SS01858
      CBC00524_1
      HGC00097_1
      PPC02772_1
      CR09841
      Dviv_isotig14401
      OOC02206_1
      ES563790.1
      GR19464
      EX010487.1
      SSC05687_1
      PPC03207_1
      TS03441
      SS02956
      HC01222
      GRC05196_1
      Oden_isotig11389
      ES567638.1
      TSC02433_1
      Dviv_isotig14399
      ES565387.1
      HBC00958_1
      Dviv_isotig14400
      Tcol_isotig25898
      PSC03129_1
      SRC00150_1
      ACC09677_1
      TS00155
      EX502051.1
      PTC02678_1
      CR02168
      Oden_isotig11387
      Acan_isotig21152
      ES561139.1
      Hbac_isotig01312
      Acan_isotig11032
      EX553553.1
      FC543227.1
      Acan_isotig08692
      ES564395.1
      HSC01481_1
      EX012777.1
      ES410769.1
      Oden_isotig11388
      Oden_isotig11386
      EX500489.1
      SSC02261_1
      Tcol_isotig00805
      Oden_isotig29345
      FC553992.1
      EX008354.1
      AM743914.1
      EX012123.1
      ACC28647_1
      SR01227
      ES566918.1
      CR09730
      HS01138
      TSC06799_1
      HCC00560_1
      PPC02782_1
      CRC01987_1
      CRC12235_1
      Tcol_isotig00806
      EY470927.1
      HBC12823_1
      PT00488
      GPC02598_1
      GP03282
      ES567219.1
      EX567186.1
      ES272999.1
      TDC03341_1
      GW410868.1
      BXC00479_1
      JI167400.1
      CBC14619_1
  Experimental_info: Microarray_results: GPL14372_Probes_90038
      GPL14372_Probes_90039
      GPL14372_Probes_90040
      GPL14372_Probes_90041
      GPL14372_Probes_90042
      GPL14372_Probes_90045
      GPL14372_Probes_90046
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190208 pad] The CGC name Ppa-idha-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-idha-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene