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WormBase Tree Display for Gene: WBGene00304687

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Name Class

WBGene00304687SMapS_parentSequencePPA_ChrIV
IdentityVersion4
NameCGC_namePpa-gdh-1From_analysisInferred_from_orthology
Sequence_namePPA46908
Molecular_namePPA46908
PPA46908.1
PP18922
PPA46908.2
Public_namePpa-gdh-1
SpeciesPristionchus pacificus
HistoryVersion_change121 Feb 2019 14:49:04WBPerson4055EventCreated
208 May 2019 10:09:24WBPerson1983Name_changeCGC_namePpa-gdh-1
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-gdh-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgdh
RNASeq_FPKMWBls:000003251.7454From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010128.2138From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
32.8961From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00303005
00303006
00303007
Ortholog (38)
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor. Predicted to be involved in amino acid metabolic process. Is an ortholog of C. elegans gdh-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA46908
Corresponding_CDS_historyPPA46908:pp275
Corresponding_transcriptPPA46908.1
PPA46908.2
Other_sequenceAE00362
FC820661.1
CSC01792_1
MI04073
CRC04999_1
Name_isotig04076
JI462169.1
Tcir_isotig05649
PT00576
SRC05669_1
MIC00985_1
SSC03339_1
Name_isotig04068
CBC03789_1
SR00976
FG353176.1
SC01599
FC819436.1
JI473562.1
FG584146.1
SR05148
SR05173
FC815763.1
EX008947.1
FC815823.1
HG02614
GO252807.1
TS00312
ACC27610_1
HCC00006_1
ES880617.1
SR03355
BUC01796_1
FG620045.1
FC811100.1
MI07653
CR02731
ES273007.1
FC814096.1
TDC00762_1
SR03798
FC820672.1
ASC22912_1
ASC01059_1
EH005311.1
ES413762.1
RSC01434_1
JF826245.1
FC811540.1
Tcol_isotig18628
Tcir_isotig16321
CRC00029_1
PT00566
Tcol_isotig06255
SR03763
SR03272
EX011976.1
ES880336.1
BE491821.1
GRC01922_1
FE916960.1
FC816007.1
TX00128
EH005453.1
AS04690
MIC06660_1
EX914513.1
TSC13242_1
HCC00304_1
FC817951.1
EY465342.1
Tcir_isotig24423
JI218801.1
NBC04014_1
FC814346.1
PSC01787_1
CGC01133_1
EX011532.1
SR05144
CR10929
FC814597.1
ES880571.1
FK670270.1
EL889356.1
FK799825.1
GQ288402.1
CB037553.1
HG03188
TX00893
TX01965
JO475046.1
TSC00780_1
TSC09428_1
Name_isotig04960
FC543811.1
GQ288401.1
FC818818.1
FE916390.1
BE899655.1
OVC00604_1
SR03085
Tcol_isotig06256
TCC00575
Dviv_isotig13828
FC820112.1
PPC18922_1
EX014266.1
ES408997.1
BG734302.1
FC818836.1
EL888637.1
AM744120.1
HG05177
FF681172.1
AI130055.1
ES565440.1
Oden_isotig22922
AS04051
FC819457.1
GR13083
EH005406.1
JI169691.1
AM744193.1
HCC02379_1
AS01638
HC02734
EH005465.1
PP00579
PVC03686_1
JI170824.1
OVC08960_1
ASC08599_1
FE916824.1
CGC01340_1
GR978053.1
GW412255.1
FC816574.1
HCC00006_2
EX911429.1
BF727613.1
XIC03924_1
HC06997
SC00429
SR01065
ES570729.1
GRC00727_1
EX011015.1
HC02402
AS10181
TCC02360_1
Hbac_isotig00530
AS06136
EX500107.1
Name_isotig07384
JO467793.1
ES880357.1
EH005266.1
TSC00286_1
AIC00223_1
AM744162.1
SRC06685_1
TS01018
CJC03454_1
AM744789.1
MJC02674_1
JI473810.1
TX00653
JI168032.1
CR07717
AS08542
ACC04939_1
PPC00946_1
HC03999
FC810581.1
EH005454.1
AS06660
SSC02794_1
HS00313
MJ03564
RS06213
ES741050.1
FC820722.1
FD514848.1
FE910507.1
TLC00289_1
FC813576.1
WBC00117_1
FC820351.1
SRC05669_2
TLC00071_1
JI168654.1
BMC02592_1
Dviv_isotig13829
TCC00017_1
SS01048
AS00707
TCC00329_1
FC813597.1
FG352473.1
TSC09905_1
Acan_isotig03869
JI481065.1
FC819534.1
HG07752
EX009243.1
AS04353
XI04787
EX012288.1
FC820401.1
AA294481.1
OVC01309_1
AS05863
ES562945.1
FG580555.1
XIC05428_1
GR979327.1
BG734439.1
FC816442.1
PPC07615_1
FC818834.1
CRC05568_1
OOC00698_2
CR09802
AI511493.1
AE02459
CBC00929_1
FC810420.1
TDC02329_1
FF680848.1
FC816051.1
JO474413.1
ES561132.1
JI245047.1
EX501791.1
SRC00503_1
CBC02382_1
ES562144.1
TMC00852_1
AA610996.1
EY464414.1
JI228236.1
HC05233
HGC02768_1
TLC00047_1
NB06504
AM744601.1
SRC05514_1
EX009460.1
PT01799
SR00239
CBC05618_1
JO470432.1
SRC00331_1
CJC02829_1
FC540688.1
ES743861.1
Dviv_isotig13830
ACC24532_1
AYC02405_1
ES880221.1
EH005382.1
JO472344.1
ES564201.1
ES744246.1
AIC00059_1
Tcol_isotig06257
HSC00133_1
MI01548
MC01426
ASC01388_1
TX00965
SRC05706_1
ES562829.1
JI173188.1
FE918143.1
FC812320.1
FC813724.1
Dviv_isotig13827
FC819605.1
EW744697.1
ES413481.1
JI169507.1
AS05367
FC813665.1
BG734409.1
AI096064.1
PT02522
GW410467.1
ASC00224_1
NB07219
HBC03137_1
OVC01315_1
CR01977
SR04390
FC544849.1
EX012410.1
Oden_isotig20429
PTC00979_1
ASC08233_1
CB184054.1
FC810617.1
ALC00060_1
XIC03542_1
FK802497.1
FC814604.1
EX914633.1
CRC09749_1
RS08461
EX009565.1
ES410342.1
BE132558.1
SRC03702_1
AE01261
SS00219
FC814644.1
TSC08185_1
EY471192.1
Acan_isotig03870
HGC01892_1
CR08220
EH005605.1
BUC00392_1
SRC00331_2
FC814587.1
GR12862
ACC03157_1
TSC09431_1
NBC00443_1
XI05375
JI179158.1
FC810247.1
ASC20263_1
GW412693.1
CD455146.1
ASC35291_1
ES563156.1
BU585424.1
AI096331.1
EX913814.1
Oden_isotig28309
HC02699
PTC01206_1
CB038688.1
TM01257
ES562588.1
JO473540.1
JI210745.1
FE918340.1
OOC00698_1
PSC02178_1
EW743730.1
HCC06703_1
AS07362
FC817089.1
MA00263
EH005607.1
SRC05514_2
HC09796
FG350358.1
MCC00554_1
CRC09792_1
FC814304.1
SRC00503_2
FE916133.1
MAC02219_1
FC546038.1
ES880212.1
FC820679.1
NB09533
ES567694.1
CR03923
XI02810
JO468484.1
ES570038.1
FG580911.1
EX014687.1
EY461540.1
JI169023.1
ES563526.1
ASC39531_1
HC04037
ES569084.1
BG734328.1
FD517284.1
EX916188.1
FE916442.1
EX010863.1
FC815631.1
FE915249.1
FC810977.1
AS05925
Experimental_infoMicroarray_resultsGPL14372_Probes_76526
GPL14372_Probes_76527
GPL14372_Probes_76529
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_S.marcescens_regulated
WBPaper00041606:PP_X.nematophila_regulated
Remark[210528 pad] The CGC name Ppa-gdh-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene