WormBase Tree Display for Gene: WBGene00000133
expand all nodes | collapse all nodes | view schema
WBGene00000133 | SMap | S_parent | Sequence | C05E11 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | amt | ||||||
Allele (74) | |||||||
Strain | WBStrain00032482 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00048219 | ||||||
00048220 | |||||||
00048221 | |||||||
00048222 | |||||||
00048223 | |||||||
00048224 | |||||||
00048225 | |||||||
00106841 | |||||||
00106842 | |||||||
00106843 | |||||||
Ortholog (41) | |||||||
Paralog | WBGene00004358 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00004359 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00000136 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00000135 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00000134 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | amt-1 encodes a transmembrane transporter that by homology, is predicted to transport ammonium ions across the plasma membrane; as loss of amt-1 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of AMT-1 in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00005654 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable ammonium transmembrane transporter activity. Predicted to be involved in ammonium homeostasis and ammonium transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C05E11.4 | |||||
Corresponding_transcript | C05E11.4.1 | ||||||
Other_sequence | Hbac_isotig00997 | ||||||
FK802911.1 | |||||||
FK808822.1 | |||||||
HG02101 | |||||||
HGC02422_1 | |||||||
Associated_feature | WBsf1004993 | ||||||
WBsf1004994 | |||||||
WBsf1022810 | |||||||
WBsf235605 | |||||||
Experimental_info | RNAi_result | WBRNAi00039771 | Inferred_automatically | RNAi_primary | |||
WBRNAi00010221 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028510 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1024425 | ||||||
Expr1143857 | |||||||
Expr2009325 | |||||||
Expr2027561 | |||||||
Drives_construct | WBCnstr00037714 | ||||||
Construct_product | WBCnstr00037714 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (282) | |||||||
Interaction (57) | |||||||
Map_info | Map | X | Position | -7.22562 | Error | 0.005176 | |
Positive | Positive_clone | C05E11 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |