WormBase Tree Display for Gene: WBGene00000432
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| WBGene00000432 | SMap | S_parent | Sequence | C34C6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ceh-7 | Person_evidence | WBPerson83 | |||||
| Sequence_name | C34C6.8 | ||||||||
| Molecular_name | C34C6.8 | ||||||||
| C34C6.8.1 | |||||||||
| CE08568 | |||||||||
| Other_name | CELE_C34C6.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | ceh-7 | ||||||||
| DB_info | Database | AceView | gene | 2I994 | |||||
| WormQTL | gene | WBGene00000432 | |||||||
| WormFlux | gene | WBGene00000432 | |||||||
| NDB | locus_tag | CELE_C34C6.8 | |||||||
| NCBI | gene | 174391 | |||||||
| RefSeq | protein | NM_063447.4 | |||||||
| SwissProt | UniProtAcc | P20270 | |||||||
| UniProt_GCRP | UniProtAcc | P20270 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (12) | |||||||||
| Legacy_information | [C.elegansII] NMK. Encodes diverged homeoprotein (novel class).[Burglin et al 1989]ceh-8I2.48NMK. Encodes homeoprotein.[Burglin et al. 1989] ceh-9I-19.89NMK. Similar to sea urchin gene TgHbox5.[Hawkins and McGhee 1990] | ||||||||
| [C.elegansII] NMK. Encodes diverged homeoprotein (novel class). [Burglin et al 1989] | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00039796 | ||||||||
| 00039797 | |||||||||
| 00039798 | |||||||||
| 00039799 | |||||||||
| 00039800 | |||||||||
| 00039801 | |||||||||
| 00039802 | |||||||||
| 00039803 | |||||||||
| 00039804 | |||||||||
| 00107392 | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00000429 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00000430 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018022 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00044032 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012584 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022554 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | ceh-7 encodes a homeodomain transcription factor; expressed in cells around the rectum of the male tail. | Paper_evidence | WBPaper00003393 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in I3 neuron; head neurons; and in male. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34C6.8 | |||||||
| Corresponding_transcript | C34C6.8.1 | ||||||||
| Other_sequence | AF091459 | ||||||||
| CJC04786_1 | |||||||||
| Associated_feature | WBsf978577 | ||||||||
| WBsf223538 | |||||||||
| Transcription_factor | WBTranscriptionFactor000153 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00041857 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011584 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1264 | ||||||||
| Expr7462 | |||||||||
| Expr15603 | |||||||||
| Expr1015544 | |||||||||
| Expr1145875 | |||||||||
| Expr2009905 | |||||||||
| Expr2028145 | |||||||||
| Drives_construct | WBCnstr00010180 | ||||||||
| WBCnstr00012606 | |||||||||
| WBCnstr00037544 | |||||||||
| Construct_product | WBCnstr00016694 | ||||||||
| WBCnstr00037544 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (24) | |||||||||
| Interaction (83) | |||||||||
| Map_info | Map | II | Position | 0.846084 | Error | 0.00155 | |||
| Positive | Positive_clone | C34C6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| NE12 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
