WormBase Tree Display for Gene: WBGene00001145
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WBGene00001145 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C16C2 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | eat | ||||||
Allele (53) | |||||||
Legacy_information | [Leon Avery] Strong Eat: slippery isthmus and corpus. | ||||||
See also ad702 | |||||||
[C.elegansII] ad702 : strong Eat: slippery isthmus and corpus. [Avery 1993; DA] | |||||||
Strain | WBStrain00022805 | ||||||
WBStrain00023483 | |||||||
WBStrain00026411 | |||||||
WBStrain00004787 | |||||||
WBStrain00005505 | |||||||
WBStrain00022017 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (27) | |||||||
Ortholog (38) | |||||||
Paralog | WBGene00001179 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00004344 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004345 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004349 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004350 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | The eat-16 gene encodes an RGS protein that affects movement, pharyngeal pumping, egg laying, and synaptic transmission; it genetically interacts with the egl-30 and goa-1 signaling pathways, and is expressed in excitable cells and in the spermatheca. | Paper_evidence | WBPaper00004713 | |||
WBPaper00004721 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables GTPase activator activity. Involved in several processes, including phospholipase C-inhibiting G protein-coupled receptor signaling pathway; regulation of cell communication; and response to monoamine. Located in cytoplasm; neuron projection; and plasma membrane. Expressed in HSNL; HSNR; neurons; pharyngeal muscle cell; and vulval muscle. Human ortholog(s) of this gene implicated in bradyopsia 1. Is an ortholog of human RGS9 (regulator of G protein signaling 9). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0070363 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10004) | ||
Molecular_info | Corresponding_CDS | C16C2.2a | |||||
C16C2.2b | |||||||
Corresponding_CDS_history | C16C2.2:wp77 | ||||||
Corresponding_transcript | C16C2.2a.1 | ||||||
C16C2.2b.1 | |||||||
Other_sequence (34) | |||||||
Associated_feature | WBsf643615 | ||||||
WBsf655796 | |||||||
WBsf656787 | |||||||
WBsf218329 | |||||||
WBsf218330 | |||||||
WBsf218331 | |||||||
Experimental_info (9) | |||||||
Map_info | Map | I | Position | 3.86852 | Error | 0.003422 | |
Well_ordered | |||||||
Positive | Positive_clone | C16C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 2469 | |||||
2470 | |||||||
4866 | |||||||
4836 | |||||||
Landmark_gene | |||||||
Reference (94) | |||||||
Remark | Interacting_genes '[Leon Avery] unc-31: Partially suppresses the Unc phenotype of unc-31. | ||||||
Sequence From: paul sternberg via ACEDB feedback page <pws@caltech.edu> | |||||||
Sequence connection from [Hadju-Cronin YM, Sternberg PS] | |||||||
old_name sag-2 becomes new_name eat-16 from [Hadju-Cronin Y, Sternberg PW]. | |||||||
Method | Gene |